Gene Rfer_1054 details

Gene Information

• Locus tag: Rfer_1054
• ID: 3963750
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Rhodoferax ferrireducens T118
• Kingdom: Bacteria
• Replicon accession: NC_007908
• Strand: -
• Start bp: 1118003
• End bp: 1120045
• Gene Length: 2043 bp
• Protein Length: 680 aa
• Translation table: 11
• GC content: 48%
• IMG OID: 637915875
• Product: hypothetical protein
• Protein accession: YP_522326
• Protein GI: 89899855

Plasmid Coverage information

• Num covering plasmid clones: 10
• Plasmid unclonability p-value: 0.525342
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCATATAG GAACTCAGCT TACAGCGCCT AATGGTTGGG GCGACTGGGC AAAGAATGAA 
CGCTACTATT TCTCTGGAAC ACACGAGGAG CAAGTTCTTA TTGTGTCCTT TTTCATTCAC 
GACGATGCTT GGCGCGTGAG TCTGAGGCGT GTACCAAAAG AAACCTTTGA AGATGCCCTC 
ACTGGGAGCG CAAGGAAGAT ATTGAGAATT CAAGAGCAAT TTGCATTGCC GCCTTGGCTC 
CAGCTGATGG AGGACGTGGA TTTCGACTCA CGCGAAAAGA TGCGCTACAA AAAAAAGAAA 
GGGGAATATG TTGATACCGT CAAAACTAGA AGAACGGCGA TTGAACCCCT GCTGAAGCGA 
CAGTCAGAAA TACTTGGATC AGACAATCCA CTGGCACAGA TAGCCAAGAT TGGTCGCGAG 
TGTTCACCCA CGCAGCATCC ACACCGCCTC CAGTTATGGT TTTTTGCATT CATCTTGCAT 
GGAAAACATG ATTGGGCACT GAATGCTTCA CAGGGCTTAA TTGGGCAATG GAAGCGTGAC 
TATAAGAAGT ATGGATTGAA AAAATTTGGC AGAACATACA AGGACGAAGG GACTCAATAT 
GGGTGGTCAT CAATTCACTT TAGGCAAGAA GTGGAGACGA CATACCTGTC CTATTGCGGT 
CAGTACAAAA GTATGATGTC GATCTACAAC CGAGCCATGC TTGACGATTT TGGTTGTGAA 
GTTCAAAAAC ATAACAGCGG AGGCCGATCA ATATACCAAC CAAACAACCA TCCTTACCCA 
AGTTACAGCC AGTATCGGAA GATTGTGGTG GATGCTTTTG GCCTTGACGC TGTGCAAACA 
GCAATTTATG GTCATGTCCG GATGAGAAAT AAGGCGACTG TCAATGAAGG CTGCTACGTC 
GATCAGTTCA AAAATCTGCT TGAAAGCATA GAAGTGGACG CCTATCGATG TGACGACCGG 
GCTCACGCTG CGTTTTCAGA CGAAGCCATG CCAGCACTCA TCGTTGCGCG GGCAATTTGC 
GTGAAAACTG GAGCAGTAGT TGGTGTTGGC TTCAGCCTCG GGGGCGAAAA GCGCGAAGCC 
TATCGATCCA TGCTGTTGTG TATGGCACTA CCCAAGTCGC TGGTGGCAAA GTTATATGGA 
ATACCCGAAA AGATGCTGGA TTGGCCAATG TCGGGCATGT CACCATCAAT GCTGTCTGAC 
CGAGGGCCAG CTGGATTTGA GTCTCTCCTT GACGATCTTG AGGAAAAAAT ACCGATCAAA 
TCGGGCGCCC CCAGCTATCA ACCCAGATCC AAACCCTTTG TTGAGGGTTC CAACCCAAAA 
TCAGTTCTGC AGGAAGGTGC GCCCAGCTTC ATACTCAGCG ATCTTGACCT GCCATCAATG 
ATGCGTCGTG AAATCATGCG CGCGGTGAAG CAAAACCGAT CCAAAGATAT TTCATCTCAT 
CTGTCAGAAC AAGAGATTGT TGAATTCAAT CGACTTGGAC TAACTGCGAC GCCGCAGGCA 
TATTGGGGCT ATCTTTCAGA TCGACTACGC ACAAGTGGTT ACAGCATGCT TCCTAACCAA 
GCGGTCAAGG CATTTTGTAA GCCGATCAAA TTAGCGGTCG ATCGAACCGG CGTGCTTCTG 
TATACCAGGC ACTATTCTTC AGAGACATTT CGATCTGAAG GACTGCATGC ACTAGCAGCA 
AGAGTTCAGC CAAAGGGTCT AAAAGGATAT TGCATTCCCT TGGCGACAAG ATATATCTGG 
ATGGAATTTG CCGGAAAACT TATTGACCTT GAGGCCCTGA AATCCGGATC TTCAAATGGA 
GAAGACTACT TTATTCCTCT TTCTGTGTTG GAGGATTTGG GCAAAGCGCT TGCTGAACTG 
CAGTCCAGGA CGCGCAAGTC GGGTCGAGCT GCCAACATCG AAGTAGAACA AGAATTTAAG 
GAACTCACTG GAAAAGCGTG GGATGCCGGA ACTTCAAGAA GCGGGACGCC AAAAAGGGGA 
CGTGGGACGG TAGCTCATGA GGTCGCTGTC ATGAATGACA AAATCAGGGT AGGCGCTCGA 
TGA 

 

Protein sequence

MHIGTQLTAP NGWGDWAKNE RYYFSGTHEE QVLIVSFFIH DDAWRVSLRR VPKETFEDAL 
TGSARKILRI QEQFALPPWL QLMEDVDFDS REKMRYKKKK GEYVDTVKTR RTAIEPLLKR 
QSEILGSDNP LAQIAKIGRE CSPTQHPHRL QLWFFAFILH GKHDWALNAS QGLIGQWKRD 
YKKYGLKKFG RTYKDEGTQY GWSSIHFRQE VETTYLSYCG QYKSMMSIYN RAMLDDFGCE 
VQKHNSGGRS IYQPNNHPYP SYSQYRKIVV DAFGLDAVQT AIYGHVRMRN KATVNEGCYV 
DQFKNLLESI EVDAYRCDDR AHAAFSDEAM PALIVARAIC VKTGAVVGVG FSLGGEKREA 
YRSMLLCMAL PKSLVAKLYG IPEKMLDWPM SGMSPSMLSD RGPAGFESLL DDLEEKIPIK 
SGAPSYQPRS KPFVEGSNPK SVLQEGAPSF ILSDLDLPSM MRREIMRAVK QNRSKDISSH 
LSEQEIVEFN RLGLTATPQA YWGYLSDRLR TSGYSMLPNQ AVKAFCKPIK LAVDRTGVLL 
YTRHYSSETF RSEGLHALAA RVQPKGLKGY CIPLATRYIW MEFAGKLIDL EALKSGSSNG 
EDYFIPLSVL EDLGKALAEL QSRTRKSGRA ANIEVEQEFK ELTGKAWDAG TSRSGTPKRG 
RGTVAHEVAV MNDKIRVGAR