| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_1032 |
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| Symbol | |
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| ID | 3963631 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodoferax ferrireducens T118 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007908 |
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| Strand | - |
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| Start bp | 1091283 |
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| End bp | 1091966 |
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| Gene Length | 684 bp |
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| Protein Length | 227 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 637915854 |
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| Product | amino acid ABC transporter permease |
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| Protein accession | YP_522305 |
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| Protein GI | 89899834 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0765] ABC-type amino acid transport system, permease component |
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| TIGRFAM ID | [TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.000000922275 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGACTTACG TATTTGAATT TTCGGATGTA CTTGCTGCAT GGCCTCGACT GCTAAGCGGC
CTAAAGTACA CCGCTGAACT GTCTGCGGCG GGCATCGTCT TTGGCTTTGT GCTAGGGACC
CTGTCCGCTA TCGTGCGGCA CCAAAAGTTG CCGGTACTCA ATGGCATCGT CTCGGTCTAC
GTGGAGGCAA TCCGCAACAC ACCGTTTCTC GTCCAGGCTT TTTTGGTGTT TTTTGGACTT
TCCACCCTGG GTATTCGTTT GAGTGCAGAA TTTTGTGCAG CACTCGCGCT GACCCTGAAT
GCCGGCGCAT ACACCTGCGA AATCATGCGG GCCGGGCTGG ATGCCACCCA CAAGGGTCAG
ATCGAGGCGG CAGAGTCCCT AGGCATGGGC TGGCCCGCCA TTTACTGGCA TGTGATGTTG
TTGCCCGCAA TCGAAAAGGT GTATCCGGCG CTGACCAGTC AATTTGTGTT GCTCATGCTG
TCCACCAGCA TCACCTCGCA AATCTCGGCC GAAGAATTAA CCGGTGTCGC AAACATCGTG
CAGTCGGAGA CGTTCCGCAG CTTTGAGGTT TATCTGTTGG TGGGGGCGAT TTATCTGGCT
CTCTCATTTG TCTTCCGCAT GATCTTTTGG GTCGTCGGAA AGCTGTGCTT TACCAGCACG
CGGGTGCTTG GTCCTTCTTC TTAA
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| Protein sequence | MTYVFEFSDV LAAWPRLLSG LKYTAELSAA GIVFGFVLGT LSAIVRHQKL PVLNGIVSVY
VEAIRNTPFL VQAFLVFFGL STLGIRLSAE FCAALALTLN AGAYTCEIMR AGLDATHKGQ
IEAAESLGMG WPAIYWHVML LPAIEKVYPA LTSQFVLLML STSITSQISA EELTGVANIV
QSETFRSFEV YLLVGAIYLA LSFVFRMIFW VVGKLCFTST RVLGPSS
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