| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_1031 |
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| Symbol | |
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| ID | 3963630 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodoferax ferrireducens T118 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007908 |
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| Strand | - |
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| Start bp | 1090627 |
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| End bp | 1091271 |
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| Gene Length | 645 bp |
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| Protein Length | 214 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 637915853 |
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| Product | amino acid ABC transporter permease |
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| Protein accession | YP_522304 |
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| Protein GI | 89899833 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0765] ABC-type amino acid transport system, permease component |
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| TIGRFAM ID | [TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.00000917559 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGATTTCAG GCATACAAAT TCAATATCTG GGCGTGGCTG CTTTGTGGAC AGTGGGTCTA
ACGCTTATGG CGCTGATCGG TGGCAGTATT CTGGGCTTCT GCATTGCGTT GTTCAGGGTC
TCACCCAATA GTGTCTTGCG ATACCTTTCT GTTGTGTACA TCCAGACGAT TCAAGGCATC
CCTCTACTTG TCCTGCTGTT CATTGCCTAT TTCGGCTTCA GTATTGCCGG CTTTAACCCC
AGTCCATTTG TCACTGTCGT GGTTGCGTTC TCGCTTTATA GCGCGGCCTA CTTGGGTGAG
ATTTGGCGTG GATGCATTCA GACAGTTCCA AAACCCCAAT GGGAAGCCTC CGGCAGCCTG
GGCTTTAACC GATACCAGCA GTTGCGTCTG GTCATTATTC CGCAGGCCTT TCGGATAGCT
ACACCGCCCA CCGTGGGATT TCTGGTGCAG CTGGTGAAGA ACACTTCGTT GGCATCAACT
GTAGGGTTTA TCGAACTGGC ACGAGCAGGA CAAATTCTCA ATAACACCAC GTTCAAACCG
TTTTCCGTAT TTTTGCTGGT TGCACTGTTT TACTTTGGAC TGTGCTTCCC GCTATCTCTA
TTGAGCAAAA AGCTAGAAAG GTCTCTGAAT GTCGCACATC GTTAA
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| Protein sequence | MISGIQIQYL GVAALWTVGL TLMALIGGSI LGFCIALFRV SPNSVLRYLS VVYIQTIQGI
PLLVLLFIAY FGFSIAGFNP SPFVTVVVAF SLYSAAYLGE IWRGCIQTVP KPQWEASGSL
GFNRYQQLRL VIIPQAFRIA TPPTVGFLVQ LVKNTSLAST VGFIELARAG QILNNTTFKP
FSVFLLVALF YFGLCFPLSL LSKKLERSLN VAHR
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