Gene Rfer_1007 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRfer_1007 
Symbol 
ID3963722 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodoferax ferrireducens T118 
KingdomBacteria 
Replicon accessionNC_007908 
Strand
Start bp1061696 
End bp1062526 
Gene Length831 bp 
Protein Length276 aa 
Translation table11 
GC content65% 
IMG OID637915830 
Productenoyl-CoA hydratase/isomerase 
Protein accessionYP_522281 
Protein GI89899810 
COG category[I] Lipid transport and metabolism 
COG ID[COG1024] Enoyl-CoA hydratase/carnithine racemase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.57099 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCCCAT CTTCTGCTCC CCAATTAACG ACCGTAGCCC CCCATCCGGC GGAGCAGAGC 
GCGGCTGTGC TGTGCTGGCG CGACGGCGCC GTGGCGCATC TGCGCTTCAA TCGTCCGCAG
GCGCTCAATG CCATCGATAC GCGCATGGCA AACGAATTTC ATGCCGCCTG TCAGGCGATC
GCCGACGACG CGCACGTGCG TGTGGTGTGG GTTTCAGCCG AGGGACGTGC CTTTATGGCG
GGCGGTGATC TTTCGGCCAT GCGATCGGAT CCGCTGCCCG CGGCGCGCGC GCTAATCGCC
GGCATGCACG GCGGCCTGCG CCTGCTGGCG GGCCTGCAGG CGCCGGTAGT GGCCAGTGTG
CAGGGCGCTG TGGCCGGCGG TGGTTTTGGG TTGATGCTGG GCTGCGACCT GGTGATTGCC
GCCGAGGGCA CCCGTTTCGG TATTGCCTAC CCGCTGATAG GCGCCAGTTG CGATTGTTCG
ACATCCTGGG GTCTGCCGCG GCTTGTTGGT TTGCGCAAAG CACTGGAACT GGCCCTCCTG
TCCGAGAACA TTGACGCCGC CGAGGCGCTG CGACTGGGTC TGGTCAACCG GGTTGTACCG
ACGGCTGATC TGGCACTCGA AACCGGGCGC CTGGTTCGCC GCTTGGCCGA TGGTCCGACG
CTGGCCTACG GGCACCTCAA GCGATTGATG CGTACGTCCT TTCAGAACGG GCTCGACACA
CACTTGGACG CCGAGGCCGA CGGCTTCCTG GCCTGTGCTC AGACCGATGA TTTCGCCGAA
GGCGTCGGTG CCTTCCTGGA CAAGCGTGCC GCTGTCTTTA CCGGCCACTG A
 
Protein sequence
MTPSSAPQLT TVAPHPAEQS AAVLCWRDGA VAHLRFNRPQ ALNAIDTRMA NEFHAACQAI 
ADDAHVRVVW VSAEGRAFMA GGDLSAMRSD PLPAARALIA GMHGGLRLLA GLQAPVVASV
QGAVAGGGFG LMLGCDLVIA AEGTRFGIAY PLIGASCDCS TSWGLPRLVG LRKALELALL
SENIDAAEAL RLGLVNRVVP TADLALETGR LVRRLADGPT LAYGHLKRLM RTSFQNGLDT
HLDAEADGFL ACAQTDDFAE GVGAFLDKRA AVFTGH