Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rfer_1007 |
Symbol | |
ID | 3963722 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodoferax ferrireducens T118 |
Kingdom | Bacteria |
Replicon accession | NC_007908 |
Strand | + |
Start bp | 1061696 |
End bp | 1062526 |
Gene Length | 831 bp |
Protein Length | 276 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 637915830 |
Product | enoyl-CoA hydratase/isomerase |
Protein accession | YP_522281 |
Protein GI | 89899810 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG1024] Enoyl-CoA hydratase/carnithine racemase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.57099 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGACCCCAT CTTCTGCTCC CCAATTAACG ACCGTAGCCC CCCATCCGGC GGAGCAGAGC GCGGCTGTGC TGTGCTGGCG CGACGGCGCC GTGGCGCATC TGCGCTTCAA TCGTCCGCAG GCGCTCAATG CCATCGATAC GCGCATGGCA AACGAATTTC ATGCCGCCTG TCAGGCGATC GCCGACGACG CGCACGTGCG TGTGGTGTGG GTTTCAGCCG AGGGACGTGC CTTTATGGCG GGCGGTGATC TTTCGGCCAT GCGATCGGAT CCGCTGCCCG CGGCGCGCGC GCTAATCGCC GGCATGCACG GCGGCCTGCG CCTGCTGGCG GGCCTGCAGG CGCCGGTAGT GGCCAGTGTG CAGGGCGCTG TGGCCGGCGG TGGTTTTGGG TTGATGCTGG GCTGCGACCT GGTGATTGCC GCCGAGGGCA CCCGTTTCGG TATTGCCTAC CCGCTGATAG GCGCCAGTTG CGATTGTTCG ACATCCTGGG GTCTGCCGCG GCTTGTTGGT TTGCGCAAAG CACTGGAACT GGCCCTCCTG TCCGAGAACA TTGACGCCGC CGAGGCGCTG CGACTGGGTC TGGTCAACCG GGTTGTACCG ACGGCTGATC TGGCACTCGA AACCGGGCGC CTGGTTCGCC GCTTGGCCGA TGGTCCGACG CTGGCCTACG GGCACCTCAA GCGATTGATG CGTACGTCCT TTCAGAACGG GCTCGACACA CACTTGGACG CCGAGGCCGA CGGCTTCCTG GCCTGTGCTC AGACCGATGA TTTCGCCGAA GGCGTCGGTG CCTTCCTGGA CAAGCGTGCC GCTGTCTTTA CCGGCCACTG A
|
Protein sequence | MTPSSAPQLT TVAPHPAEQS AAVLCWRDGA VAHLRFNRPQ ALNAIDTRMA NEFHAACQAI ADDAHVRVVW VSAEGRAFMA GGDLSAMRSD PLPAARALIA GMHGGLRLLA GLQAPVVASV QGAVAGGGFG LMLGCDLVIA AEGTRFGIAY PLIGASCDCS TSWGLPRLVG LRKALELALL SENIDAAEAL RLGLVNRVVP TADLALETGR LVRRLADGPT LAYGHLKRLM RTSFQNGLDT HLDAEADGFL ACAQTDDFAE GVGAFLDKRA AVFTGH
|
| |