| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_1006 |
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| Symbol | |
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| ID | 3963721 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodoferax ferrireducens T118 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007908 |
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| Strand | + |
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| Start bp | 1059922 |
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| End bp | 1061562 |
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| Gene Length | 1641 bp |
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| Protein Length | 546 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 637915829 |
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| Product | AMP-dependent synthetase and ligase |
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| Protein accession | YP_522280 |
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| Protein GI | 89899809 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTTGGCT TAATGCAGGA CCGCCCACTG TTGATTTCAT CCCTGATCGA GCACGCCGCG
ACATTTCACC CCGGCACTGA AATTGTTTCG CGCCTGCCGG AAGGCCCCTT GCACCGCACC
AACTGGGGTG AACTGCGCGA CCGCAGCAAG CAAGTGGCGA ACGCCCTCAC GTCTTTGGGC
ATCAAGCCGG GCGAGCGCGT CGGCACGCTG GCGTGGAATT CACACCGCCA TCTGGCTCTG
TACTACGGCG TTGCGGGAAG CGGGGCGGTT TTGCATACGG TCAATCCGCG CCTGTTTCCG
GAACAGATTG ACTACATCAT CAATCATGCT GAAGACCAGA TTCTGTTCTT CGACATCACG
TTTGCGACAC TGGTTGAGCA GTTGGCGCCG GTACTGAAGA CGGTGAAAGC TTTCATCGCC
ATGACGGATC GCGCGCACAT GCCCGACATC CAGGTGCCGA ACCTGCTGTG CTATGAAGAG
CTGCTCGACG CGCAGAGCAC GGACTACACC TGGCCTGAAT TCGACGAGCG TTCGGCGTCG
TCGCTGTGCT ACACCTCGGG TACCACGGGC AACCCCAAGG GGGTTCTGTA CTCTCATCGT
TCCACCGTGC TGCACACGCT GATGGAGCTA GCCCCCGATA CCTTCGGCAT CAGTTCGAAC
GAAACCCTGC TGCTGATTGT CCCCATGTTC CACGCCAATG CCTGGGGCAT GCCCTATGCC
GCAGCGATGG TCGGCGCCAA GCTCGTCTTT CCCGGACCGC ACCTGGATGG CAAGAGTATT
TATGCACTGA TGCGCGACGA GCGCGTCACC TTCTCGCAGG GGGTTCCAAC GGTCTGGATG
ATGCTTTTTC AGTACATGGA CGCCAGTCCC GACCTTGACC CGCGCCAACT GGGCGTCAAG
CGGATCGGCA TTGGCGGCGC GGCCGTGTCG CGCGCCATGC TTGAGCGTTT TGAAAATGAT
TTCGGCGCTG AAGTGGTACA GGGCTGGGGT ATGACCGAAA CCAGTCCCAT TGGTGTGATC
AGCAAGCTCC TGCTCAAGCA CGCCAACGTC CCGCACGAAG ACCTGGTCAA GGTCAAGCTC
AAACAGGGAC GGGGCGTCTG GGGTGTGGAC TTGAAAATCG TGGATGCGCA AGGTTGCGCC
CTGCCTTGGG ATGGTGTGGC TTTCGGACAC CTGCTGGTGC GTGGCCCCTG GATTGCCAGC
GGTTATTTTA GGGACGAGGG TGGCGCTGTG CTGGATGCCG AAGGCTTTTT CCCGACCGGC
GATGTGGCGA CCATCGACTC GGATGGCTAC CTGCAGTTGG TAGACCGGGC CAAGGACGTG
ATCAAGTCCG GCGGCGAGTG GATTTCCTCG ATCGACGTTG AGAACGCCGC CAGTTCCCAT
CCGGCCGTGG CCGAGGCCGC CGTCATCGGT GTTGCCCATC CCAAGTGGCA GGAGCGACCA
CTGCTTGTGG TCGTCAAGCG TCCCGGTGTC AAGGTCGAGG CCAAGGACAT TCTGGATCAC
CTGAGTCAGC GCGTCGCCAA GTGGTGGTTG CCCGATGATG TGGTGTTCGT TGACAGTTTG
CCGCACACGG CGACCGGGAA ATTGCTGAAA ACCAGCTTGC GTCAGCAGTT TCGCGATTAC
CAGCTTCCCG GCACCAGTTG A
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| Protein sequence | MLGLMQDRPL LISSLIEHAA TFHPGTEIVS RLPEGPLHRT NWGELRDRSK QVANALTSLG
IKPGERVGTL AWNSHRHLAL YYGVAGSGAV LHTVNPRLFP EQIDYIINHA EDQILFFDIT
FATLVEQLAP VLKTVKAFIA MTDRAHMPDI QVPNLLCYEE LLDAQSTDYT WPEFDERSAS
SLCYTSGTTG NPKGVLYSHR STVLHTLMEL APDTFGISSN ETLLLIVPMF HANAWGMPYA
AAMVGAKLVF PGPHLDGKSI YALMRDERVT FSQGVPTVWM MLFQYMDASP DLDPRQLGVK
RIGIGGAAVS RAMLERFEND FGAEVVQGWG MTETSPIGVI SKLLLKHANV PHEDLVKVKL
KQGRGVWGVD LKIVDAQGCA LPWDGVAFGH LLVRGPWIAS GYFRDEGGAV LDAEGFFPTG
DVATIDSDGY LQLVDRAKDV IKSGGEWISS IDVENAASSH PAVAEAAVIG VAHPKWQERP
LLVVVKRPGV KVEAKDILDH LSQRVAKWWL PDDVVFVDSL PHTATGKLLK TSLRQQFRDY
QLPGTS
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