| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_1005 |
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| Symbol | |
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| ID | 3963720 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodoferax ferrireducens T118 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007908 |
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| Strand | + |
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| Start bp | 1058593 |
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| End bp | 1059816 |
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| Gene Length | 1224 bp |
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| Protein Length | 407 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 637915828 |
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| Product | extracellular ligand-binding receptor |
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| Protein accession | YP_522279 |
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| Protein GI | 89899808 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGTCAAAT CTTTAGATGC CGGTCGGCGG CATTCTCTCA AGCTCGGCGT CGGTCTGCTC
ATGGTGGCCA CCTTGCCGCT TGCGGTTCAC GCGCAAAAAA AATATGACAC GGGCGCCAGT
GACACCGAAA TCAAGATCGG AAACCTGACG CCGTATTCCG GGCCTGCCTC TGCTTACGGC
GCTTGTGGAA AGGCCATGGC CGCCTATTTT TCCAAGCTGA ATGCCAGCGG CGGCATCAAT
GGTCGCAAAG TCAACTTCAT GACCGCCGAC GATGCCTACA ACCCGGCCAT ATCGGTTGAG
CAGACGCGCA AGCTGGTGGA GCAGGAGGAG GTGCTGCTGA TGTTCGCCTC GCTGGGCACA
TCTCACAACA TGGCGGTGCA ACGCTACCTC AACGCCAAAA AAATTCCGCA GCTGTTCGTC
AACACGGGCG CCACGCGCTT CGGCGACCCC AAGAATTTTC CCTGGACAAT GGGTTGGCAG
CCCACCTATC AGACAGAAGG TCAGCTTTAT GCACGGCACA TCCTCGCCAC CAAGCCCAAT
GCCAAGATCG CGGTGCTGAT GCAAAACGAT GATTTCGGCA AGGACTATAT GAAAGGCCTG
ACCGATGGAC TTGGCGAGAA GGGAAAACAC TTGATCGTGT TGCACCTGAC ACACGAGGTG
ACCGACCCCA CCATTGACAG CCAGATGGTG TCATTCAAGG CCTCGGGCGC TGATGTGTTC
GTGATCATGA CCACACCCAA GTTCGCTGCC CAGGCGATCC GCAAATCGGC CGAGATCGGC
TGGAAGCCGA CCCAGTATTT GGTCAGCGTT TCGCAGTCGG CCAGTGCGGT GCTCAAGCCC
GCAGGTGTTG AAAATGCAGT CGGCGTGATC TCGTCGACCT ACCTGCTCAG CCCCACTGAT
CCTGCTGCGG TTGGCAATAA GGATGTAGCC GAGTATCTGG CGACGATGAA GCAGTATTAC
CCCGCTGGCG ATCCGGAGGA TACGCTCAAC TCGATCGGCT ACGCCGCAGC CGCAACAATG
ACGCAGGTAT TGCGTCAAGC CGGCGACAAC CTGACTCGGG AGAACATCAT GAAACAGGCG
GCCAGCCTCC ACTTCACGCC ACCTATGCTG TACCCCGGCA TCGACGTCAG GACCGCTTCC
GACGACTTCT TTCCGATCGA GAAAAAGGTC CTGCAACGCT TCAATGGCAA GGCCTACGAA
GTGATCAGTT CGACTGGTGG CTAG
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| Protein sequence | MVKSLDAGRR HSLKLGVGLL MVATLPLAVH AQKKYDTGAS DTEIKIGNLT PYSGPASAYG
ACGKAMAAYF SKLNASGGIN GRKVNFMTAD DAYNPAISVE QTRKLVEQEE VLLMFASLGT
SHNMAVQRYL NAKKIPQLFV NTGATRFGDP KNFPWTMGWQ PTYQTEGQLY ARHILATKPN
AKIAVLMQND DFGKDYMKGL TDGLGEKGKH LIVLHLTHEV TDPTIDSQMV SFKASGADVF
VIMTTPKFAA QAIRKSAEIG WKPTQYLVSV SQSASAVLKP AGVENAVGVI SSTYLLSPTD
PAAVGNKDVA EYLATMKQYY PAGDPEDTLN SIGYAAAATM TQVLRQAGDN LTRENIMKQA
ASLHFTPPML YPGIDVRTAS DDFFPIEKKV LQRFNGKAYE VISSTGG
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