| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_0996 |
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| Symbol | |
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| ID | 3963711 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodoferax ferrireducens T118 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007908 |
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| Strand | - |
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| Start bp | 1048290 |
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| End bp | 1051082 |
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| Gene Length | 2793 bp |
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| Protein Length | 930 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 637915820 |
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| Product | ATP-dependent transcription regulator LuxR |
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| Protein accession | YP_522271 |
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| Protein GI | 89899800 |
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| COG category | [K] Transcription |
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| COG ID | [COG2909] ATP-dependent transcriptional regulator |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGACGGCT TTTCCCGCGC AAACGCTCTG GCCCACAAGC CTTCCGGCGC GGCCTTCGAC
TCTTTGCAGC GATACATGCC CGCTTTCTCC CACAACGATC CAGGACCAAT GAGCGCCGCC
ACGCCGGCCG GACCTTCAGT CGGCTCCGCG GGACTCGACA ACAAGTTCAA CCCGCCGGCG
CCGATGGCCG CCCAGGTGCA GCGCCAGGGC CTGTGCGAGG CGATTTGCCG CTCTGCCGGA
CAGTTGGTGC TGGTCAGTGC ACCCGCCGGC TTTGGCAAGA CCACGGCCAT GGTGCAGGCC
CGCGCGCGGC TTGAACAAAC CGGCGTGAGC ACCGTCTGGC TGACACTGGA CCGCGCCGAC
AACGATGTCT CACGCTTCAT GATCTGCTTG GGCGAGGCCG TCACGCGGCT CGGCTTGGGC
GGTCCGGATG CGGCCGCCGG CGTCGACTCC GTGCAGGCGC TGGCACGCAG CGACATCCCG
TTTGCGCTGT TTCTCGACGA GTTCGAAACC GTGCACGAGG CGGCGGTGCT GGGCCTGGTG
CGCGAAATCG CCGATCACCT GCCGCGCGGC GGACATTTGA TCATTGGCTC GCGCAGCCTG
CCGCAGTTGG GCCTGGCCCG GCTACGGGTG CGCGGCCTGC TGACCGAAAT CGACGCCGAC
CGCCTGCGCT TCAGCCTTCA GGATGCGCTG ACCCTGTTCG AGCAACGGCG CCAGCCAAAC
GTCCTGAGCA CCGAGCAGCT GTTCCGTCTG CACCAGAAAA CCGAGGGCTG GGCCACCGCG
CTCTGGCTGG CGTCGATCGC GCTGGACCGC ACCGTCGACC AAAGCGACTT CGTCGACCGG
TTCTCGGGAT CAAACCGGGC CGTGGCCGAC TACCTGGCCG AGGATGTACT GGCGCGCCAG
CCAACCCACA TCCGGCGCTT TCTGCTGCGC ACAAGCCTGC TGCGCCAGCT CGACGCCTCG
GTCTGCGCCG CGCTCAATCC CCGCGCCGAC TGCGTGGCGC TACTTGAACA ACTGGATGCC
GAGCACCTGT TCCTGAGTCC GGTAACGGGT GCGCGTCGCA CGTGGCGCTA CCACAGCCTG
TTCGCCGACT ACCTGCGCAC CCAGCTTGAG CGCGAGCACC CGGACGATGT GGCGCGCCTG
CATCTGGCGG CCTCGGGCTG GTACGAATCG AAGGACCGGC CGGTGCCGGC GATCGACCAC
GCCATCGAGG GCGGCGATTT CCCGCACGCC ATGAGCCTGC TCGACAGCCA CGCCGACGCC
TTTCTGGAAC AGGGTCGCAT GCGCCTGTTG TCGCGCTGGT TCGCCAGCAT GCCGCCGAGC
CAGCGCCAAG CCCACCCGCG ACTGGAGATG ATCGCGATCT GGGCCGCCTG CTTCACACGC
GGTCCCTGGG AAGCGATGGA AATGCTTGAA CGATCCGGCG CCAGCGCCAG CGACGACCCT
TACTTGCGCG CCAACGCCAA CGGCATCCGG CCGATGCTGC TGGCGATGCA GGACCGCAAC
GAGGAATCAC TGGAGGTGGG CCGCGAAGCG CTGCGTCAGT TGCCCACCGG TCACCAGTTT
GCCGACACCA CGCTGCTCAA TGCCATGGCG CACAACCTGG CCGTGATGGG TGATCAGCGC
GAGGCCCAGC AACTGCTGGA CGCCGCCCGG CGCGAGCAGG GCGGCAGCAG CACCTTCAAC
CGCATGTACA CCGAGTCCAC GGAAGGCCTG CTCGATCTGC AGCAGGGGCG TCTGCGCCAA
GCCACGGCAC GCTTTCGCCT GGCGGTAGAC GCCACCCATG CGATAAGCCA TACGCACACC
CACGGGAACG CACTGGCCGG CGTCTACTAT GCCTGCGCGG TCTACGAACT CAACCAGCTC
GACCAGGCCG AGCACCTGCT CAACGTCTAC CTGCCGATCA CGCGCGATAT CGGCCTGCCC
GACCACATGA TCCTCGCCCA CGCCATGCGC TCGCGCATCG CTTTCATCAA TGGCGATGTG
GACGCTGCCT CGCTCGCCAT CACGGAGCTC GAATACCTCG GCAACCAGCG CAAGCTGCCG
CGGGTGGTCG CGGCGGCCAA GCTCGAGCGC GCCCGCATGC TCCAGTTGCA GGGCAATGCA
GCGGCGGCGC ACGACGAGCT GATGCGGGCC GACGACCCCA CCTTGTGGAG CCGCGAGCAG
CGCCAGCGCA TGCTGGCGCA TGACATCCAG TACATGGCAA TGGCCCGCCT GCGCTGGGAG
ATCGCGTTTG GCGACGCGGG CGCCTGCCTC GGTAGGCTGG ATGCTGAAAA GAAACGGGCC
GCCGAGGCCG GTCGCCACCG TCGCCTGCTG GTGCTGCGCC TGCTGCACGC CCTGGCCTTG
CAACGCACCG GCGACATGCC GGCTGCTGTG ACGGAGATCG GCACCGCGCT GCAGTTTGCC
TGCCAGGAAG GCTTCATGCG CTTGATCCTC GATGAGGGCC CGGCGGTCGG CGCACTGGTG
CAGCGTTACC AGTCCCTGCA CGACAGCGGC CAGATGCGCG ACCCTTTGCT GGGCGACTAC
CTGCAGCGCC TGCTGCAGGC CTTTGGTCCG CTACCGACAG AGATCGAAGC AACGCCGGAA
CTGCTCGGCG GCGTGCTGGA GCCGCTGACA CGCAAGGAAA TCCGCGTGCT GCAACTGCTG
GTCGAGGGCT ACTCGAACAG CGCAATGGCG GAAAAGCTGT TCGTCTCCGA CAGCACGGTG
CGCACCCACC TGCGCAACAT CAACATGAAG TTCGGCGCCC ACAGCCGCAC ACAGGCGGTG
GCGATTGCGC GCCGGCTCGG CCTGATCGCC TGA
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| Protein sequence | MDGFSRANAL AHKPSGAAFD SLQRYMPAFS HNDPGPMSAA TPAGPSVGSA GLDNKFNPPA
PMAAQVQRQG LCEAICRSAG QLVLVSAPAG FGKTTAMVQA RARLEQTGVS TVWLTLDRAD
NDVSRFMICL GEAVTRLGLG GPDAAAGVDS VQALARSDIP FALFLDEFET VHEAAVLGLV
REIADHLPRG GHLIIGSRSL PQLGLARLRV RGLLTEIDAD RLRFSLQDAL TLFEQRRQPN
VLSTEQLFRL HQKTEGWATA LWLASIALDR TVDQSDFVDR FSGSNRAVAD YLAEDVLARQ
PTHIRRFLLR TSLLRQLDAS VCAALNPRAD CVALLEQLDA EHLFLSPVTG ARRTWRYHSL
FADYLRTQLE REHPDDVARL HLAASGWYES KDRPVPAIDH AIEGGDFPHA MSLLDSHADA
FLEQGRMRLL SRWFASMPPS QRQAHPRLEM IAIWAACFTR GPWEAMEMLE RSGASASDDP
YLRANANGIR PMLLAMQDRN EESLEVGREA LRQLPTGHQF ADTTLLNAMA HNLAVMGDQR
EAQQLLDAAR REQGGSSTFN RMYTESTEGL LDLQQGRLRQ ATARFRLAVD ATHAISHTHT
HGNALAGVYY ACAVYELNQL DQAEHLLNVY LPITRDIGLP DHMILAHAMR SRIAFINGDV
DAASLAITEL EYLGNQRKLP RVVAAAKLER ARMLQLQGNA AAAHDELMRA DDPTLWSREQ
RQRMLAHDIQ YMAMARLRWE IAFGDAGACL GRLDAEKKRA AEAGRHRRLL VLRLLHALAL
QRTGDMPAAV TEIGTALQFA CQEGFMRLIL DEGPAVGALV QRYQSLHDSG QMRDPLLGDY
LQRLLQAFGP LPTEIEATPE LLGGVLEPLT RKEIRVLQLL VEGYSNSAMA EKLFVSDSTV
RTHLRNINMK FGAHSRTQAV AIARRLGLIA
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