| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_0985 |
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| Symbol | |
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| ID | 3963584 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodoferax ferrireducens T118 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007908 |
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| Strand | - |
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| Start bp | 1034175 |
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| End bp | 1035710 |
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| Gene Length | 1536 bp |
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| Protein Length | 511 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637915809 |
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| Product | extracellular solute-binding protein |
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| Protein accession | YP_522260 |
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| Protein GI | 89899789 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0747] ABC-type dipeptide transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.252461 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACAGAA AGTCCTTCTC TCTGGCGGTC CTGGCCGCCG CGGTCGCCGT GTCGGTGACC
ACCCTGCACG CGCAAACGCT CGGTGGCAAT GCCATCGTGG CCATCACCCA GGCTCCGCCG
ACGCTGGACG CGCAGGTCAC CACCATCCAA TCCGCGCGCC ACATCAACTT GCACATCTAC
GAGACGCTTT ACGCACGCGA CGAGAATGGC AAGCCAGTGC CAGACTTGGC TGAAAGCGTG
GCAATCTCGC CCGACGGCAA GACCTACACC CTGGCACTGC GTAAGGGCGT GAAGTTCCAC
AATGGCAAGA CCATGGGCTC GGCCGACGTG GTGGCCTCGC TGGAACGGTA CCGCAAGATT
GGAGCAAACG CCAACTTGCT GTCCGAGGTG GAGACCATCT CCGCCAAAGG CCCCAATGAG
GTGGTAATCA AGCTCAAGAA GGTGCAGTCC ACGCTGCTCG ACACGCTTTC GTCATCGACC
GCGCCGCTGG CCATCTACCC GGCTGAGGAA GCGGCCAAGG GAGCCAACAA GATCGCCTAC
ATCGGTACCG GCCCTTTCAA GTTCGTCGAG TTCATCCCCG ACAGCCACGT CAAGCTCGAG
CGCTTCAAGG ACTATGTGCC CAACCCGCAC TACACCAAAC GCGATGGCTT CGCGGGAAAG
AAGGAGGTCT ACCTCGACAC AGTGACCTTC CGCTTCATGC CCGAGGCGGG CGCGCGCGTG
GCGGCGCTGC AGTCGGGCGA GGTTCAACTG GTGGAGACGG TGGACGGACC GACCAAAAAG
AGGCTGGAGA CCAACCCGGC CTTCAAGATC TACAAGCTGT TGCCCTTCTC GTTCCAGATC
ATCAAGCTCA ACCACGCGGT ACCGCCCACC GACAACCTCG CGTTCCGTCA GGCCGTGGTG
GCGACGCTCG ACATGGAAGA GATTATGTCG ATTGCCTACC CCGACATCTA TCAACTCGAC
GGCGGCTGGC TATATCCGAA GTCGCCGGCC TACGTGGGGG TCGGCCTTAA TACGTACAAC
AAGCCCGACC TGAAAAAGGC CAGGGAGCTG GTCGTGAAAT CGGGCTACAA GGGCGAGAAG
ATCACCTTCC TGGTCGACAA CCTACGCGCC AACACTGACA CCGCCACCGT GGTGCAACAG
CGTCTGGCGC AGATTGGCGT CAACGTCGAC ATCAAGGTCA CCGACTGGCC GACCGCCGTG
AAGATCGGCT GGTCGCCGGA GGGCTGGAAC CTTTTTGCCC ACGGCTTCGG CATCCAGCCC
TTCGAAGGGC CGGGCACGGT GATGTCGGCT TGGGCGGGCG GCCAGCTCCA CCAAAAACCC
GACGCCGAGA TCGATCGCCT GTACGCAGCC TACAGCGGCG AGTTGGATGC TGAGAAGGGC
AAGACCTTGT TCGCCTCCTT CCAGCAGCAC ATGATCAACG ACGTGATCGC CATCAAGGTC
GGCAACTACG GCCTGTTCCA GGTCGGCACC GCCAAGCTTC GCAACTTCGA ACCCTACCGC
ATCCCACGCA TGTGGGGCGT CTGGCTCGAC AAGTGA
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| Protein sequence | MNRKSFSLAV LAAAVAVSVT TLHAQTLGGN AIVAITQAPP TLDAQVTTIQ SARHINLHIY
ETLYARDENG KPVPDLAESV AISPDGKTYT LALRKGVKFH NGKTMGSADV VASLERYRKI
GANANLLSEV ETISAKGPNE VVIKLKKVQS TLLDTLSSST APLAIYPAEE AAKGANKIAY
IGTGPFKFVE FIPDSHVKLE RFKDYVPNPH YTKRDGFAGK KEVYLDTVTF RFMPEAGARV
AALQSGEVQL VETVDGPTKK RLETNPAFKI YKLLPFSFQI IKLNHAVPPT DNLAFRQAVV
ATLDMEEIMS IAYPDIYQLD GGWLYPKSPA YVGVGLNTYN KPDLKKAREL VVKSGYKGEK
ITFLVDNLRA NTDTATVVQQ RLAQIGVNVD IKVTDWPTAV KIGWSPEGWN LFAHGFGIQP
FEGPGTVMSA WAGGQLHQKP DAEIDRLYAA YSGELDAEKG KTLFASFQQH MINDVIAIKV
GNYGLFQVGT AKLRNFEPYR IPRMWGVWLD K
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