Gene Rfer_0982 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRfer_0982 
Symbol 
ID3963581 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodoferax ferrireducens T118 
KingdomBacteria 
Replicon accessionNC_007908 
Strand- 
Start bp1031324 
End bp1032328 
Gene Length1005 bp 
Protein Length334 aa 
Translation table11 
GC content68% 
IMG OID637915806 
Productoligopeptide/dipeptide ABC transporter, ATP-binding protein-like 
Protein accessionYP_522257 
Protein GI89899786 
COG category[E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism 
COG ID[COG0444] ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component 
TIGRFAM ID[TIGR01727] oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.143233 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACACAGC CGGTACTCGA CATCCGGGGC CTGACCACGG CCCTCGGCCA CAAGGGCCAG 
ACCACCATCC TCGAAGACGT GACGCTGGAG GTTGCCGCCG GCGAGGTGCT CGGCGTGGTT 
GGCGAATCGG GCAGCGGCAA GAGCATGCTG GCGTTAGCCG TCATGGGGCT GCTGCCATCC 
GGTATCCAAT GCACCGCAGG CAGCATACGC CTGCTGGGCG ACGAGCTCAC CGCTGGCAGC 
GCGTCGGCAT GGCGGGCGCG GCGCGGGCCC GACATGGCCA TGGTGTTCCA GGAGCCGATG 
TCCTCGCTCA ACCCGGTGAT GCGCATCGGC GCGCAAATCG AGGAGGTGCT GCGCCGCCGC 
CTCCGCATGA AGGGCGACGC CGCGACCCGC CGCGCGCTCG ACCTGCTCGA ACGTGTGGAG 
ATCCCGTCGG CCAAGAGCCG GCTTGCGGTC TACCCGCACG AGATGTCCGG TGGCATGCGC 
CAGCGCGTCA TGATCGCCAT GGCGCTGGCC TGCGACCCCA AGCTGCTGAT TGCCGACGAG 
CCGACCACCG CACTCGACGT GAGCATACAG GCGCAGATAC TGGACCTGCT GCGCGCGATA 
CAGCGCGAAA CCGGAATGGC CTTGATGCTC ATCACGCACG ACCTTGGTGT GATTGCCGAG 
ATGGCCGACC GCGTGATGGT GCTGTACGCC GGTCGCGTGG CAGAGACCGC TCCAGTACAA 
GTGCTGTTCG ACACACCGGC CCACCCCTAT TCACGCGCAT TGCTGGACTC GGTGCCCACG 
GTCGCCACCC GGGTCGAGCG CCTGACCACG ATTGAAGGCT CGGTGCCTGC GGTCGGAGCC 
ATGCCCCCTG GTTGCCGCTT CGCGCCGCGT TGCGCGCATC GCACCAATGC CTGCGACATG 
GAACCGCCCG CCAGCCGCCT GCTGATGTCC GGCCATTCGG TGGCCTGCCT GCATCTCGGC 
GCCGTCACCC CCGCGGCGCC GATTGCCATG GAGACGAATT CGTGA
 
Protein sequence
MTQPVLDIRG LTTALGHKGQ TTILEDVTLE VAAGEVLGVV GESGSGKSML ALAVMGLLPS 
GIQCTAGSIR LLGDELTAGS ASAWRARRGP DMAMVFQEPM SSLNPVMRIG AQIEEVLRRR 
LRMKGDAATR RALDLLERVE IPSAKSRLAV YPHEMSGGMR QRVMIAMALA CDPKLLIADE 
PTTALDVSIQ AQILDLLRAI QRETGMALML ITHDLGVIAE MADRVMVLYA GRVAETAPVQ 
VLFDTPAHPY SRALLDSVPT VATRVERLTT IEGSVPAVGA MPPGCRFAPR CAHRTNACDM 
EPPASRLLMS GHSVACLHLG AVTPAAPIAM ETNS