Gene Rfer_0981 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRfer_0981 
Symbol 
ID3963580 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodoferax ferrireducens T118 
KingdomBacteria 
Replicon accessionNC_007908 
Strand- 
Start bp1030341 
End bp1031327 
Gene Length987 bp 
Protein Length328 aa 
Translation table11 
GC content66% 
IMG OID637915805 
Productoligopeptide/dipeptide ABC transporter, ATP-binding protein-like 
Protein accessionYP_522256 
Protein GI89899785 
COG category[E] Amino acid transport and metabolism 
COG ID[COG4608] ABC-type oligopeptide transport system, ATPase component 
TIGRFAM ID[TIGR01727] oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.382351 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAGCGCTG CACCCGATAC CGATATCCTG ATCGAAGCAC GCGGGCTCGC CAAGCACTTC 
CCGGTGCGTA GCGGCGTCCT GGGCATGGGC CACAAGGCCG TGGTGCGCGC GGTCGATGGC 
GTGGACCTGA GCATACGCAA GGGCGAGACG TTGGGCCTGG TCGGCGAGTC CGGTTGCGGC 
AAATCGACAA CCGGCCGCCT GCTGCTGCGC CTGATCGAGC CGAGCGCGGG CTCCATTGTG 
CATGAAGGCG TTGATCTGAC CACGCTGGAC CGACGCCAGA TGCGCGAGCG GCGCCGGCAC 
ATGCAGATCA TCTTCCAGGA CCCATTCGCG TCGCTGAACC CGCGGATGAC GGTGGCGTCC 
ATCATCGGGG AAGCCTTCGC GATCCACGGC GTGGGCACCT CTTCCGAACG GCAGACACGG 
GTGGCCGAGC TGCTCGATCT GGTGGGGCTG CCGCGTAGCG CCGCCGCCAA GTATTCGCAT 
GAATTCTCAG GCGGCCAGCG CCAGCGCATA GGGATTGCGC GCGCACTGGC GCTCAAGCCG 
GCCTTCGTGG TCTGCGACGA GGCGGTGTCG GCGCTGGACG TGTCGGTGCA AGCTCAGATC 
ATCAACCTTA TGCAGGACCT GCAGCGCGAG CTGGGCCTGA CCTACCTCTT CATCTCGCAC 
AACTTGTCGG TGGTGCGGCA CATCTCGACG CGCATCGCGG TGATGTACCT CGGGCGCATC 
GTAGAGATCG CCACGGCCGA TGAGTTGTTC GAACGTCCGA CGCACCCCTA CACCCGCGCT 
TTGCTGTCGG CCGTACCCAT CGCTCACCCC AACGACCAAC GCCACCGCCA TATGCTTGGT 
GGCGACGTGC CCAGCGCGCT GGACATACCG GCTGGCTGCC GCTTCGCGCC GCGCTGTCCG 
GTCGCACAGG ACCGCTGCCG CAGCGAAGAC CCTCTGTTGA GTCCGTTGCC CGACGGGCGA 
CGGGTGGCCT GTCACTATGC TGCTTGA
 
Protein sequence
MSAAPDTDIL IEARGLAKHF PVRSGVLGMG HKAVVRAVDG VDLSIRKGET LGLVGESGCG 
KSTTGRLLLR LIEPSAGSIV HEGVDLTTLD RRQMRERRRH MQIIFQDPFA SLNPRMTVAS 
IIGEAFAIHG VGTSSERQTR VAELLDLVGL PRSAAAKYSH EFSGGQRQRI GIARALALKP 
AFVVCDEAVS ALDVSVQAQI INLMQDLQRE LGLTYLFISH NLSVVRHIST RIAVMYLGRI 
VEIATADELF ERPTHPYTRA LLSAVPIAHP NDQRHRHMLG GDVPSALDIP AGCRFAPRCP 
VAQDRCRSED PLLSPLPDGR RVACHYAA