Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rfer_0977 |
Symbol | |
ID | 3963576 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodoferax ferrireducens T118 |
Kingdom | Bacteria |
Replicon accession | NC_007908 |
Strand | - |
Start bp | 1026019 |
End bp | 1027158 |
Gene Length | 1140 bp |
Protein Length | 379 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 637915801 |
Product | alanine racemase-like |
Protein accession | YP_522252 |
Protein GI | 89899781 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG3616] Predicted amino acid aldolase or racemase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.785974 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCGAAAC AAGTTCTGGA ACAACTGGAG ACACCCGCGC TGATTCTTGA CGAGGCCCGA ATGGACCGCA ACATCGAGCG CATGCGCAGC CATTTGCGGC GTCTCGGCGT CTCGTTCCGG CCGCACGTCA AGACCAACAA GTGCATCGAT GTGGCGCGTC GGCTCTTGGA AACGCCCCAA GACCCGATCA CGGTTTCCAC CCTTTTGGAG GCCGAGTATT TCGCGGCGCA CGGCGTCAAG GACATCCTGT ACGCCGTCTG CATCGCACCG AACAAGCTGG ACCATGTGAT GGCCCTGCAG GACAAGGGGG TCCGGCTGTC GCTCCTCCTC GACAGCATGG AGACCACCCG GCTGCTGGCC GAGCGCGCCC GCGCGACACG GCGTCACTTC GACGTGCTGA TCGAGATCGA TTCGGACGGC CACCGCTCGG GCGTGACACC CGACGCAAGC GAACTTGTCG AAATCGGCCT GTTCCTCGAG AGCGCCGGCA TTCCGGTGAA AGGGGTGCTG ACCCATGCCG GCAGTTCCTA CGACTGCGCT TCCATCGAGG CGATTCGCGC CATGGCCGAG CAGGAGCGTG CCGCGGTCGT CCTAGCGGCG CAGCGACTGC GCGCTGCGGG CATCGCGTGC CCGGTGGTCA GTATGGGCTC GACGCCGACC GCGCTGTTCG CCGAGCATCT GGAGGGCGTT ACGGAAGTGC GTGCCGGCGT ATTCGTCTTC TTCGATCTGG TGATGGCCGG CCTGAGCGTC TGCCGGCTGG ACGACATCGC CGTGTCGGTC CTGGCCACGG TGATCGGGCA CCAGCACGAA AAAGGCTGGA CCGTTCTCGA TGCCGGGTGG ATGGCCATGT CGCGCGACCG CGGCACCGCC AAGCAGCCGG TGGACCAGGG CTATGGCCTC GTTTGTGACC TTGATGGCCG GCCGCTGGAC GACTTCATTC TGGTGGGAGC CAACCAGGAG CACGGCATCA TGGCGCACCG CCATGGCAAG GCGGACCGCG CGCTGCATCT ACCCGTAGGC ACGCAGGTGC GTATCCTGCC CAATCATGCC TGTTCCACGG CAGCGCAGTA TGGCAATTAC AAGGTGTTGG GGCCCGGCCG CGAGATTACC GCGACATGGC AGCGTTTCAG CGGTTGGTAA
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Protein sequence | MPKQVLEQLE TPALILDEAR MDRNIERMRS HLRRLGVSFR PHVKTNKCID VARRLLETPQ DPITVSTLLE AEYFAAHGVK DILYAVCIAP NKLDHVMALQ DKGVRLSLLL DSMETTRLLA ERARATRRHF DVLIEIDSDG HRSGVTPDAS ELVEIGLFLE SAGIPVKGVL THAGSSYDCA SIEAIRAMAE QERAAVVLAA QRLRAAGIAC PVVSMGSTPT ALFAEHLEGV TEVRAGVFVF FDLVMAGLSV CRLDDIAVSV LATVIGHQHE KGWTVLDAGW MAMSRDRGTA KQPVDQGYGL VCDLDGRPLD DFILVGANQE HGIMAHRHGK ADRALHLPVG TQVRILPNHA CSTAAQYGNY KVLGPGREIT ATWQRFSGW
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