Gene Rfer_0977 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRfer_0977 
Symbol 
ID3963576 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodoferax ferrireducens T118 
KingdomBacteria 
Replicon accessionNC_007908 
Strand
Start bp1026019 
End bp1027158 
Gene Length1140 bp 
Protein Length379 aa 
Translation table11 
GC content65% 
IMG OID637915801 
Productalanine racemase-like 
Protein accessionYP_522252 
Protein GI89899781 
COG category[E] Amino acid transport and metabolism 
COG ID[COG3616] Predicted amino acid aldolase or racemase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.785974 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCGAAAC AAGTTCTGGA ACAACTGGAG ACACCCGCGC TGATTCTTGA CGAGGCCCGA 
ATGGACCGCA ACATCGAGCG CATGCGCAGC CATTTGCGGC GTCTCGGCGT CTCGTTCCGG
CCGCACGTCA AGACCAACAA GTGCATCGAT GTGGCGCGTC GGCTCTTGGA AACGCCCCAA
GACCCGATCA CGGTTTCCAC CCTTTTGGAG GCCGAGTATT TCGCGGCGCA CGGCGTCAAG
GACATCCTGT ACGCCGTCTG CATCGCACCG AACAAGCTGG ACCATGTGAT GGCCCTGCAG
GACAAGGGGG TCCGGCTGTC GCTCCTCCTC GACAGCATGG AGACCACCCG GCTGCTGGCC
GAGCGCGCCC GCGCGACACG GCGTCACTTC GACGTGCTGA TCGAGATCGA TTCGGACGGC
CACCGCTCGG GCGTGACACC CGACGCAAGC GAACTTGTCG AAATCGGCCT GTTCCTCGAG
AGCGCCGGCA TTCCGGTGAA AGGGGTGCTG ACCCATGCCG GCAGTTCCTA CGACTGCGCT
TCCATCGAGG CGATTCGCGC CATGGCCGAG CAGGAGCGTG CCGCGGTCGT CCTAGCGGCG
CAGCGACTGC GCGCTGCGGG CATCGCGTGC CCGGTGGTCA GTATGGGCTC GACGCCGACC
GCGCTGTTCG CCGAGCATCT GGAGGGCGTT ACGGAAGTGC GTGCCGGCGT ATTCGTCTTC
TTCGATCTGG TGATGGCCGG CCTGAGCGTC TGCCGGCTGG ACGACATCGC CGTGTCGGTC
CTGGCCACGG TGATCGGGCA CCAGCACGAA AAAGGCTGGA CCGTTCTCGA TGCCGGGTGG
ATGGCCATGT CGCGCGACCG CGGCACCGCC AAGCAGCCGG TGGACCAGGG CTATGGCCTC
GTTTGTGACC TTGATGGCCG GCCGCTGGAC GACTTCATTC TGGTGGGAGC CAACCAGGAG
CACGGCATCA TGGCGCACCG CCATGGCAAG GCGGACCGCG CGCTGCATCT ACCCGTAGGC
ACGCAGGTGC GTATCCTGCC CAATCATGCC TGTTCCACGG CAGCGCAGTA TGGCAATTAC
AAGGTGTTGG GGCCCGGCCG CGAGATTACC GCGACATGGC AGCGTTTCAG CGGTTGGTAA
 
Protein sequence
MPKQVLEQLE TPALILDEAR MDRNIERMRS HLRRLGVSFR PHVKTNKCID VARRLLETPQ 
DPITVSTLLE AEYFAAHGVK DILYAVCIAP NKLDHVMALQ DKGVRLSLLL DSMETTRLLA
ERARATRRHF DVLIEIDSDG HRSGVTPDAS ELVEIGLFLE SAGIPVKGVL THAGSSYDCA
SIEAIRAMAE QERAAVVLAA QRLRAAGIAC PVVSMGSTPT ALFAEHLEGV TEVRAGVFVF
FDLVMAGLSV CRLDDIAVSV LATVIGHQHE KGWTVLDAGW MAMSRDRGTA KQPVDQGYGL
VCDLDGRPLD DFILVGANQE HGIMAHRHGK ADRALHLPVG TQVRILPNHA CSTAAQYGNY
KVLGPGREIT ATWQRFSGW