| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_0976 |
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| Symbol | |
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| ID | 3963575 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodoferax ferrireducens T118 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007908 |
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| Strand | - |
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| Start bp | 1025027 |
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| End bp | 1025998 |
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| Gene Length | 972 bp |
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| Protein Length | 323 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637915800 |
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| Product | ornithine cyclodeaminase |
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| Protein accession | YP_522251 |
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| Protein GI | 89899780 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG2423] Predicted ornithine cyclodeaminase, mu-crystallin homolog |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.25864 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTGGATTA TTTCCGAAGA GGACGCTCGC GCCTTGGTGA GCGTTGAGAA CGCCATCACC
GAGGTCGAAA AAGCCTTCGC CGCCATGGCG CGCGGCGAAG CGCGCAATTA CCCTGTCGTG
CGCGAGGTGG TGGGCTACCA GGATGCGGTG TTCGGCGTCA AGACGGGCTG TGACACCCGT
GCACCGATTC TGGGCCTCAA GGCGGGCGGT TACTGGCCCC ATAATCTGGC AAAGAGCTTG
ACCAATCATC AGTCTTCGAC CTTGCTGTTC GATCCGGAAA CCGGCCGCGC CTCGGCCCTG
GTCAGTGCCA ACTACCTGAC CGGGGTGCGC ACCGGAGCTG CCAGCGCTAT CGCCACCAAG
TATCTGTCGC GCCCCGACAG CAGCGTGCTC GGCATCATCG GCACCGGCGC CCAGTCGGCG
TACCAGTTGC GCGCGACGCT GGCCGTGCGC CCCATCCGCA AGGTCTATGC TTGGGACCCA
TCTCCCGAAA ATCTCGTGAC TTTCGGACGC ACGGTAGCGG AACTGGGACT GGAGTATGCC
CCACAAACCG AGCGTCAGGC AGTAGCTGCC AACGCCGACA TCCTGATCAC CGTGACGCCC
TCGCAGCAGG CCTTGGTAGA AAAATCCTGG GTGCGCGTCG GCACCCACAT CAGCGCCATG
GGGGCCGACA CCAAGGGCAA GCAGGAATTG GATCCCGCCT TGGTGGCGAG CGCCACCCTG
TTCGTGGACG AGGCCCAACA GGCCATCACC ATCGGCGAAT GCCAGCATGC CTATAACGCT
GGGCTGATCA CGGACCAGAG CTTTCGCGGC AGCATCGGCG AGGTCATCGC AGGGCTCTGC
GACGGACGGC GTACAGCACA GGAAATCACC ATCTTCGATG GCACTGGTGT GGCCTTGCAG
GATCTGGTGG TGGCCGCCCT CGCCGTGCGC CTGGCCGCAG AGCGGGGCCT TGGCTCCCGC
GTCGGGTATT AG
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| Protein sequence | MWIISEEDAR ALVSVENAIT EVEKAFAAMA RGEARNYPVV REVVGYQDAV FGVKTGCDTR
APILGLKAGG YWPHNLAKSL TNHQSSTLLF DPETGRASAL VSANYLTGVR TGAASAIATK
YLSRPDSSVL GIIGTGAQSA YQLRATLAVR PIRKVYAWDP SPENLVTFGR TVAELGLEYA
PQTERQAVAA NADILITVTP SQQALVEKSW VRVGTHISAM GADTKGKQEL DPALVASATL
FVDEAQQAIT IGECQHAYNA GLITDQSFRG SIGEVIAGLC DGRRTAQEIT IFDGTGVALQ
DLVVAALAVR LAAERGLGSR VGY
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