Gene Rfer_0972 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRfer_0972 
Symbol 
ID3963571 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodoferax ferrireducens T118 
KingdomBacteria 
Replicon accessionNC_007908 
Strand
Start bp1021985 
End bp1023211 
Gene Length1227 bp 
Protein Length408 aa 
Translation table11 
GC content60% 
IMG OID637915796 
Productmajor facilitator transporter 
Protein accessionYP_522247 
Protein GI89899776 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.619052 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCCAGAA GAAGCGTCCG CAGGTTATTT GCCCACCGTC AATTCATGCG CTTTTGGTTC 
GCCAGACTTG CCGGCGTGAG CGCCAATCAA ATGCTCATGG TGGGGGTGGC CTGGCACATG
TATGACATCA CCTCCAGTGC CTGGGATCTC GGTTTGGTGG GATTGTTTCA GTTTGTACCC
GCCCTTGTTC TGATGCTGCC TGCAGGGCAC ACTGCCGACC GATTTCATCG AGGTCGCATC
TTTGCGGCCT GCATGGGCAT TCAGGCGGTG GTGGCGTTGG TGCTGATCTT CGCCACCCAG
TTCCACTTTG CCTCACGCGA GTTGATTCTT GGCATTTCGG TGTTGTTGGG GGTGGCTCGT
GCCTTCCAGA TGCCAGCACA ACAGGCATTG ACCCCTCAGC TTGTGCCGCA GGACATGCTG
CAAAGTGCGG TAGCTTTGAG CTCCAGCGGC ATGCAAGTGG CCATCATTGG TGGACCAGCA
CTTGGCGGCA TGCTGTACAC GACAGGGGCC ACAACCGTCT ATGTCACTTG CGCTCTCCTG
CTCCTGGTGT CTGCCATGCT GGCCTTGCTG GTGCGCTACC AGCACCAGCA AGCCCATCTG
GCCGCCACCT GGCAGACTGT TCTCGCTGGA TTCACCTTTG TCTGGCACCG CAAGGTCTTG
CTGGGCGCAA CTTCCCTGGA CTTGTTTGCG GTGCTGCTCG GTGGTGCCAC GGCCTTGCTG
CCGATTTATG CACGGGACAT CCTGCATACC GGGCCAATCG GGCTAGGGGT ACTGCGATCT
GCTCCTGCGG TGGGTGCACT GATGATGTCG CTGGCGATCA TGCGCTGGCC GCTGACCAGA
CACGTGGGTC GCCGGCTGTT GGCGGCCGTT GCCATTTTTG GCGTGGCCAC CATTGTCTTT
GGTCTTTCCA GCCATTTTGG GCTGTCGCTG GTGGCACTGG CGATTGCCGG GGCCGCCGAC
AGCATCAGCG TGGTGACGCG ATCAACCCTG GTTCAGTTGG AAACACCCAA CGAGATGCGG
GGCCGGGTGT CGGCGGTCAA CTCGATGTTC ATTGGTGCCT CCAACCAGTT GGGGGAATTC
GAGTCGGGAG CCACTGCAGC CCTGTTTGGC GCGGTGGGCT CTGTGGTCAT TGGAGGCGTC
GGTACGGTAT TGATCGCTGC GGGATGGTTC AGGCTGTTTC CGGCGCTGGC AAGGCGGGAC
CGGATGGGGC CGACGGTTGC GGCTTGA
 
Protein sequence
MSRRSVRRLF AHRQFMRFWF ARLAGVSANQ MLMVGVAWHM YDITSSAWDL GLVGLFQFVP 
ALVLMLPAGH TADRFHRGRI FAACMGIQAV VALVLIFATQ FHFASRELIL GISVLLGVAR
AFQMPAQQAL TPQLVPQDML QSAVALSSSG MQVAIIGGPA LGGMLYTTGA TTVYVTCALL
LLVSAMLALL VRYQHQQAHL AATWQTVLAG FTFVWHRKVL LGATSLDLFA VLLGGATALL
PIYARDILHT GPIGLGVLRS APAVGALMMS LAIMRWPLTR HVGRRLLAAV AIFGVATIVF
GLSSHFGLSL VALAIAGAAD SISVVTRSTL VQLETPNEMR GRVSAVNSMF IGASNQLGEF
ESGATAALFG AVGSVVIGGV GTVLIAAGWF RLFPALARRD RMGPTVAA