| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_0967 |
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| Symbol | |
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| ID | 3963605 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodoferax ferrireducens T118 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007908 |
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| Strand | + |
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| Start bp | 1018090 |
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| End bp | 1018758 |
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| Gene Length | 669 bp |
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| Protein Length | 222 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 637915791 |
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| Product | amino acid ABC transporter permease |
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| Protein accession | YP_522242 |
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| Protein GI | 89899771 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0765] ABC-type amino acid transport system, permease component |
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| TIGRFAM ID | [TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.027607 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGATTTTA CGCTTGGTCA ATTTTTACAT GAACTTTGGA TTGCTCGTGC ACCAATCGTC
CAAGGGCTCG GCGTCACCAT TGTGGCAGCT GCGCTAGCCA TCGTAACTGG ATCGATTCTG
GGCGTTGGCG TTGGGCTGGC ACTCACTTAT GGGGCGAAGC CGCTTCGCTG GATGACAAGG
GCGTATACCG ATTTTATTAG GGGCACGCCG GTACTGGTTT TGGTGTTGGC AAGTTACTAC
ATTCTGGGCG CTGCCGGGGT CCAACTCAGT CCCTTCCAGG CGGGCGTACT TGCCCTAGCG
GTGTTTTGCA GTTCGCACGT AGGTGAGATC GTCCGCGGCG CATTGCAGGC AATACCAGTA
GGCCAGATCG AGGCTGCCAA GGCTATTGGT TTGACTTTTT CGCAGACGTT CTTGTACATC
CTGCTACCGC AGGCCATTCG GCAAGTGTTA CCAACCTGGG TCAATACCGC AGCTGAGATG
GTAAAGGCGT CGACGCTCTT GTCCATCATA GGAGTGGGCG ACTTGCTGCT GGCATCGCAA
GAGGTTATTT CTCGCACTTT CATGAGTCTG CCGTTTTATT TCTTCGCCGG GTTTCTCTAC
TTCACGGCCA ATTTCGCCAT TGAGCATTTT GGGCGATACG TGGAACGGAA AACCAAAATT
CCCTCGTAA
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| Protein sequence | MDFTLGQFLH ELWIARAPIV QGLGVTIVAA ALAIVTGSIL GVGVGLALTY GAKPLRWMTR
AYTDFIRGTP VLVLVLASYY ILGAAGVQLS PFQAGVLALA VFCSSHVGEI VRGALQAIPV
GQIEAAKAIG LTFSQTFLYI LLPQAIRQVL PTWVNTAAEM VKASTLLSII GVGDLLLASQ
EVISRTFMSL PFYFFAGFLY FTANFAIEHF GRYVERKTKI PS
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