| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_0966 |
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| Symbol | |
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| ID | 3963604 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodoferax ferrireducens T118 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007908 |
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| Strand | + |
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| Start bp | 1017422 |
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| End bp | 1018084 |
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| Gene Length | 663 bp |
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| Protein Length | 220 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 637915790 |
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| Product | amino acid ABC transporter permease |
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| Protein accession | YP_522241 |
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| Protein GI | 89899770 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0765] ABC-type amino acid transport system, permease component |
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| TIGRFAM ID | [TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.000446908 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGATTATG TGTTGAATTT TTCTGTTGTG TGGCGAAGCT TTGACCATCT GCTGGGTGGA
CTGGGCCTCA GCCTGCTGCT TGCCTTGGGC TCGATCCTAA TTGGCATGGC GATTGGGCTT
GTGGTGAGCT TCGCATTGAT TTCCCCGGTG GCTATTGCGC GCAACCTGGC TGGCGCATAT
GTGACGGTGA CACGCAACAC GCCGCTGTTG GTACTGGTGC TGTTTACCTA TTTCGCACTG
CCAGACCTCG GCGTCCGGTT GGGCGATATC GAATCGTTTG TAGCCACCTT GGCGATATAT
TCGGGAGGCT ATCTGGCCGA AGTGTTTCGC GCTGGCATGC TGTCCGTCCC CAAAGGTTTG
AGCGAGGCGG GGCAGGCGAT CGGGCTCACG AGGATGCAAA TTCGTTTCTC GATCATCATG
CCAATCATGT TTCGCAATGT TCTGCCTGCC CTGGGCAGCA CCGTGATCTC GCTGTTTAAA
GATACGTCGC TCGCGGCAGC AATTGCTGTT CCAGAACTTA CGTACCAAGC GCGCAAGATC
AATGTGGAGA GTTTCCGCGT CGTGGAGACT TGGATCATTG CCAGCCTCCT TTATGTCTGC
ACTTGCGCTG TCCTCGCCAT GTTATTCCGG CGGGTTGAGC GCCACCTTGC CATTCCGCGG
TGA
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| Protein sequence | MDYVLNFSVV WRSFDHLLGG LGLSLLLALG SILIGMAIGL VVSFALISPV AIARNLAGAY
VTVTRNTPLL VLVLFTYFAL PDLGVRLGDI ESFVATLAIY SGGYLAEVFR AGMLSVPKGL
SEAGQAIGLT RMQIRFSIIM PIMFRNVLPA LGSTVISLFK DTSLAAAIAV PELTYQARKI
NVESFRVVET WIIASLLYVC TCAVLAMLFR RVERHLAIPR
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