| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_0955 |
|---|
| Symbol | |
|---|
| ID | 3963593 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodoferax ferrireducens T118 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007908 |
|---|
| Strand | - |
|---|
| Start bp | 1004031 |
|---|
| End bp | 1005128 |
|---|
| Gene Length | 1098 bp |
|---|
| Protein Length | 365 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 637915780 |
|---|
| Product | ABC transporter related |
|---|
| Protein accession | YP_522231 |
|---|
| Protein GI | 89899760 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG3839] ABC-type sugar transport systems, ATPase components |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.370442 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGGCCAAAG TCACTTTGAA AAACGTCGTC AAACGGTACG GATCCGTCGC CGTCGTCAAC
GATCTATCGA TCGAAATTCA GGACAAAGAA TTTGCCGTGC TGGTGGGGTC TTCGGGCTGC
GGCAAGTCGA CCGCCTTGCG CATGATCGCC GGCCTGGAAA CAATCACTTC GGGCGAAATC
TACATCGGTG ACACGCTGGT CAACGACATG GCCCCCAAGG ACCGCGACAT CGCCATGGTG
TTCCAGAATT ACGCCCTGTA CCCGCACATG AACGTGCGCG AGAACATGGG CTTCGGCCTG
AAGATTCGCA AGCTCTCCGA AGCCGAGATC GACGCCCGGG TGCAGGAGGC CGCCGACATT
CTCGGACTCA ACGAACTGCT GGAACGCAAG CCCAAAGAAC TCTCCGGTGG CCAGCGCCAG
CGCGTGGCGG TAGGCCGCGC CATCGTACGC AAGCCCAAGG TGTTCCTGTT TGACGAGCCA
CTGTCCAACC TGGACGCCAA GCTGCGCGTT GCGATGCGTG CCGAAATCAG CAAACTGCAC
CGCCGCCTGG GTGCAACCAT GATCTATGTC ACGCACGATC AAGTCGAGGC CATGACCATG
GCCGACCGCA TCTTCATCAT GAACAAGGGG GTGGTGCAGC AAAGCGGCGC GCCGATGGAA
GTCTATGCCC AGCCGGTCAA CCGTTTCGTC GCCGGCTTCA TCGGCTCGCC GGCGATGAAT
TTCTTCGACG CCCGTCTGGT CAACGAGGCC GGTCAGTTAT TCATCGATGG TGGCAGCTTC
CGCGTCGCCA TGCCTGAAGC CTTCCGCGCC AATCTAGTTG CGCACGCCGG CAAGGAGGTG
GTCTTCGGCG TTCGCCCGGA AGACATTGCG CTGCATCAAC CGGGTGCCGA CGTCGGCAGC
ACGATCAGCG CCAGGGCCGA GGTGGTGGAG TTACTCGGCT CCGAGATCTT CGCGCACCTG
AGCTGCGACG CGCATGCCTT GGTGGCGCGC ATGGCCGTGC CGAAGCAGCC GATCGGTGTC
GGCGAAACGA TCCAGATCGA TTTCAATATG GCCAACATGC ACGTGTTCGA CAAGAACACC
TCAGACGCCA TCGTTTAG
|
|---|
| Protein sequence | MAKVTLKNVV KRYGSVAVVN DLSIEIQDKE FAVLVGSSGC GKSTALRMIA GLETITSGEI
YIGDTLVNDM APKDRDIAMV FQNYALYPHM NVRENMGFGL KIRKLSEAEI DARVQEAADI
LGLNELLERK PKELSGGQRQ RVAVGRAIVR KPKVFLFDEP LSNLDAKLRV AMRAEISKLH
RRLGATMIYV THDQVEAMTM ADRIFIMNKG VVQQSGAPME VYAQPVNRFV AGFIGSPAMN
FFDARLVNEA GQLFIDGGSF RVAMPEAFRA NLVAHAGKEV VFGVRPEDIA LHQPGADVGS
TISARAEVVE LLGSEIFAHL SCDAHALVAR MAVPKQPIGV GETIQIDFNM ANMHVFDKNT
SDAIV
|
|---|
| |