| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_0954 |
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| Symbol | |
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| ID | 3963592 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodoferax ferrireducens T118 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007908 |
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| Strand | - |
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| Start bp | 1002799 |
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| End bp | 1003992 |
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| Gene Length | 1194 bp |
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| Protein Length | 397 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 637915779 |
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| Product | extracellular solute-binding protein |
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| Protein accession | YP_522230 |
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| Protein GI | 89899759 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1653] ABC-type sugar transport system, periplasmic component |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.233769 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAATATA AACTGTCAAA AATCGGGGTC GCACTGACTT CGCTGTGCCT CTGCGCGGGG
GCAATGGCGC AATCGGGTGA AATCCGCGTG CTGGTGGCCA ACCACCCGTA CGGTGAATTG
CTCAAGCTGT CGATTCCACA GTTCGAGAAA AGCACCGGCA TCAAGGTCAA CGTCGAAAGC
TTGCAGGAAA GCCAGCTGAC GCAAAAGCTC ACCACCGAAT TCGCCACCAA ATCTTCCACC
GTCGACGTCT TCATGACGCG CCCACTGCAG GAAGGCAAGA TGTTCTCGAA AAACGGCTGG
TACGCGCCCC TGACTGGCTA CGACTTCAGC GACTATCCGA AAAACATCAT GAACGCCGCC
TCTTTTGGCG GCAAACCCTA CATCGTTCCG CTGGTCACCG AATGGCAAGT GCTCTATTAC
CGCAAAGACC TGTTGCAACA GGCGGGGCTG AAAGTGCCGA CCAACTTCGA TGAACTCGAG
GCAGCCGCCC AGAAGCTCAA TTCCGAAAGC GTTGCCGGTA TCGCCTCGCG TGGCAAGGGT
GCGGCAGCCG TAACCCAGGC GTCGAGCTAC ATCTTCAACT ACGGCGGCCA GTATCTCGAC
AAAGGCGCAG CGGTCTTCAA CTCGAAGCCA GCCATCGACG CGATACGCTA TTACGGCAAA
CTGCTCGGCA ACTATGGCCC GAAGGGCGTG ACTTCGATGT CGTGGGAAAA CATCATGCCG
CTGTTCCAGG CCGGCAAGGT CGCGATGTGG ACCGACGCCT CGGTGTTCTA TGGCCAGGTC
GTCGATCAAT CCAAGACACA AATCCCGGTG GCCAACTTCG CAATTGCCAA CTTCCCGGCC
GGACCCAAGA CCAATTCGCC TTTCATCGTC TCGTCTTGGG GCATCTCGGT GGCTAGCCAG
TCCAAGAAAA AAGACCTGGC CATGAAGTTC CTGAACTGGG CGTCTAGCAA GGAAATGGCG
GTCAAAGGCA TGATGGGCAA CATCACAATG GCACGTTCAT CGGTTTGGGA GGACCAGGTC
GTGCGCAGCA AGATGAATCC CGGTCTGATC GAGACGCGCG CCTTTGCTGC CAAGAACGGC
ACGCCGGTTG ACCGGCCCTA CATGAGCGCT GTGGGCGAAG CGCGCGACCT CATCGGCGAA
CTGCCATCGA GTCGATCAAC ACCAAGGGCA CGTCCACCAA GCTCGATCAG ATAG
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| Protein sequence | MEYKLSKIGV ALTSLCLCAG AMAQSGEIRV LVANHPYGEL LKLSIPQFEK STGIKVNVES
LQESQLTQKL TTEFATKSST VDVFMTRPLQ EGKMFSKNGW YAPLTGYDFS DYPKNIMNAA
SFGGKPYIVP LVTEWQVLYY RKDLLQQAGL KVPTNFDELE AAAQKLNSES VAGIASRGKG
AAAVTQASSY IFNYGGQYLD KGAAVFNSKP AIDAIRYYGK LLGNYGPKGV TSMSWENIMP
LFQAGKVAMW TDASVFYGQV VDQSKTQIPV ANFAIANFPA GPKTNSPFIV SSWGISVASQ
SKKKDLAMKF LNWASSKEMA VKGMMGNITM ARSSVWEDQV VRSKMNPGLI ETRAFAAKNG
TPVDRPYMSA VGEARDLIGE LPSSRSTPRA RPPSSIR
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