Gene Rfer_0947 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRfer_0947 
Symbol 
ID3963701 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodoferax ferrireducens T118 
KingdomBacteria 
Replicon accessionNC_007908 
Strand
Start bp996231 
End bp997277 
Gene Length1047 bp 
Protein Length348 aa 
Translation table11 
GC content59% 
IMG OID637915773 
Productmannonate dehydratase 
Protein accessionYP_522224 
Protein GI89899753 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1312] D-mannonate dehydratase 
TIGRFAM ID[TIGR00695] mannonate dehydratase 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCTTTC GCTGGTATGG CGATACTGAC CCCGTCAAGC TCGAATACAT CCGCCAGATC 
CCCGGCCTGT ATGGCATAGT CTCCGCCATT TACGACATAC CGGTGGGCGA GGTCTGGCCC
CTGGACAAGC TGCAAGCACT GCGTGCGCGC ATTGAAGGCG CAGGGCTGAA GTTTGAAGTG
GTTGAAAGTG TGCCTACCCA CGAAGACATC AAGTTGGGCA AGCCGACGCG GGACCGCCTC
ATTGCCAACT TTCAGCAAAA CATCCGCCAT TGTGCGGCGG TGGGTGTGAA AGTGATCTGC
TACAACTTCA TGCCAGTATT TGACTGGACC CGCACCGAAA TGGCCAAGGA GCTGCCTGAC
GGCTCTTTCA CCCTGGCGTT CGACGCCAGG GCGGTTGCCA AGATTGATCC GGAAAAAGGC
ATCGCCCTGC CCGGCTGGGA CGCCAGCTAC AAACCGGAAC AGCTCAAAAG CTTGCTGGCC
GAGTACAAAG CGGTGAATGA GGAAACTCTG TGGACCAACC TCGAATACTT CCTCAAGGCC
ATCATCCCGG TCGCTGAAGG AGTGGGTATC AAGATGGCCA TGCATCCGGA CGACCCGCCG
CGCCCCATTT TTGGCTTGCC GCGCATCGTC AAGAACCGCG AAGACTTGCA GCGCCTGGTC
AACATTGTTG ACTCAACAGC CAACGGCTTG ACTCTGTGTT CGGGCTCGCT CGGCGCTGAT
TTGTGCAACA ACGTTGAAGC ATTGGTGCGC GAATTCGGCA GCCAGGGCCG AATCCACTTT
GGCCACCTGC GCAATGTCAA GGTGGAGCCG GACGGGACGT TTTATGAATC CACCCACCGG
TCCTGCGACG GTTCGCTGGA CATGGCGGCC ATCGTCAAGG CCTACCACGA CATCGGTTTC
GAGGGTTATG TGCGACCGGA CCATGGCCGC ATGATCTGGG GTGAGACCGG CAAACCTGGC
TACGGGCTGT ATGACCGCGC GCTGGGAGCC GTCTACCTGA ACGGCTTGTG GGAGGCGATC
AGCAAGTACT CGCCACCGGC CCATTAA
 
Protein sequence
MTFRWYGDTD PVKLEYIRQI PGLYGIVSAI YDIPVGEVWP LDKLQALRAR IEGAGLKFEV 
VESVPTHEDI KLGKPTRDRL IANFQQNIRH CAAVGVKVIC YNFMPVFDWT RTEMAKELPD
GSFTLAFDAR AVAKIDPEKG IALPGWDASY KPEQLKSLLA EYKAVNEETL WTNLEYFLKA
IIPVAEGVGI KMAMHPDDPP RPIFGLPRIV KNREDLQRLV NIVDSTANGL TLCSGSLGAD
LCNNVEALVR EFGSQGRIHF GHLRNVKVEP DGTFYESTHR SCDGSLDMAA IVKAYHDIGF
EGYVRPDHGR MIWGETGKPG YGLYDRALGA VYLNGLWEAI SKYSPPAH