Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rfer_0947 |
Symbol | |
ID | 3963701 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodoferax ferrireducens T118 |
Kingdom | Bacteria |
Replicon accession | NC_007908 |
Strand | - |
Start bp | 996231 |
End bp | 997277 |
Gene Length | 1047 bp |
Protein Length | 348 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 637915773 |
Product | mannonate dehydratase |
Protein accession | YP_522224 |
Protein GI | 89899753 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1312] D-mannonate dehydratase |
TIGRFAM ID | [TIGR00695] mannonate dehydratase |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACCTTTC GCTGGTATGG CGATACTGAC CCCGTCAAGC TCGAATACAT CCGCCAGATC CCCGGCCTGT ATGGCATAGT CTCCGCCATT TACGACATAC CGGTGGGCGA GGTCTGGCCC CTGGACAAGC TGCAAGCACT GCGTGCGCGC ATTGAAGGCG CAGGGCTGAA GTTTGAAGTG GTTGAAAGTG TGCCTACCCA CGAAGACATC AAGTTGGGCA AGCCGACGCG GGACCGCCTC ATTGCCAACT TTCAGCAAAA CATCCGCCAT TGTGCGGCGG TGGGTGTGAA AGTGATCTGC TACAACTTCA TGCCAGTATT TGACTGGACC CGCACCGAAA TGGCCAAGGA GCTGCCTGAC GGCTCTTTCA CCCTGGCGTT CGACGCCAGG GCGGTTGCCA AGATTGATCC GGAAAAAGGC ATCGCCCTGC CCGGCTGGGA CGCCAGCTAC AAACCGGAAC AGCTCAAAAG CTTGCTGGCC GAGTACAAAG CGGTGAATGA GGAAACTCTG TGGACCAACC TCGAATACTT CCTCAAGGCC ATCATCCCGG TCGCTGAAGG AGTGGGTATC AAGATGGCCA TGCATCCGGA CGACCCGCCG CGCCCCATTT TTGGCTTGCC GCGCATCGTC AAGAACCGCG AAGACTTGCA GCGCCTGGTC AACATTGTTG ACTCAACAGC CAACGGCTTG ACTCTGTGTT CGGGCTCGCT CGGCGCTGAT TTGTGCAACA ACGTTGAAGC ATTGGTGCGC GAATTCGGCA GCCAGGGCCG AATCCACTTT GGCCACCTGC GCAATGTCAA GGTGGAGCCG GACGGGACGT TTTATGAATC CACCCACCGG TCCTGCGACG GTTCGCTGGA CATGGCGGCC ATCGTCAAGG CCTACCACGA CATCGGTTTC GAGGGTTATG TGCGACCGGA CCATGGCCGC ATGATCTGGG GTGAGACCGG CAAACCTGGC TACGGGCTGT ATGACCGCGC GCTGGGAGCC GTCTACCTGA ACGGCTTGTG GGAGGCGATC AGCAAGTACT CGCCACCGGC CCATTAA
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Protein sequence | MTFRWYGDTD PVKLEYIRQI PGLYGIVSAI YDIPVGEVWP LDKLQALRAR IEGAGLKFEV VESVPTHEDI KLGKPTRDRL IANFQQNIRH CAAVGVKVIC YNFMPVFDWT RTEMAKELPD GSFTLAFDAR AVAKIDPEKG IALPGWDASY KPEQLKSLLA EYKAVNEETL WTNLEYFLKA IIPVAEGVGI KMAMHPDDPP RPIFGLPRIV KNREDLQRLV NIVDSTANGL TLCSGSLGAD LCNNVEALVR EFGSQGRIHF GHLRNVKVEP DGTFYESTHR SCDGSLDMAA IVKAYHDIGF EGYVRPDHGR MIWGETGKPG YGLYDRALGA VYLNGLWEAI SKYSPPAH
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