| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_0941 |
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| Symbol | |
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| ID | 3963695 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodoferax ferrireducens T118 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007908 |
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| Strand | + |
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| Start bp | 990898 |
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| End bp | 991716 |
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| Gene Length | 819 bp |
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| Protein Length | 272 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637915767 |
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| Product | 2-dehydro-3-deoxyglucarate aldolase |
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| Protein accession | YP_522218 |
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| Protein GI | 89899747 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3836] 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase |
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| TIGRFAM ID | [TIGR02311] 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAACAC CTGTCAACAC CTTCAAACAA GCCTTGCAGA ATCAGCAGGT CCAGATCGGC
CTTTGGGTTG ACTTGGCCGA CGGCCTGTGC GCCGAACTCG TGGCCGGCAT CGGCTACGAC
TGGCTGCTGC TCGATGGCGA ACACGGTCCC AGTGACCTAC GCACAATGCT TGCGCAATTG
CAGGGCGTCT CCAGCGCCCA GGGTTCTATC CCCGGCCTGG CTACGCACCC GATCGCACGC
GTGCCGATGG GCGAGGTCGC CATCATCAAG CAGTTTCTCG ACCTTGGCGT ACAGACCCTG
CTTGTGCCCA TGGTGGATAC GGCCGAACAG GCCGCGCAGA TGGTGCGTGC CATGCGTTAC
CCGCCCGACG GCATCCGCGG CATGGGTAGC TCGGTGGCCC GCTCGTCGCG CTGGCAGGGC
TACCCTAACT ACATTCAGGA GGCGAATGAA CAAGTCTGTC TGCTGGTGCA AGCGGAGACG
GTCGAGGCCA TGCGCAACCT CGACGCGATC GCCGCCACAC CCGGAGTAGA CGGCGTGTTC
ATCGGGCCTG CCGACCTTTC GGCTTCGATG GGTTTTCCGG GCAATCCGGA TCACCACGAA
GTGCAGGTCG CCATCGCGGA TAGCATCGCA CGCATTCTCA AGGTCGGCAA GGCACCTGGC
ATCATCGCCA CGACAGAGGA GCAAGCGCGT AAATGGCTGG CAGCTGGCGC GTTGTTCGTA
GCCGTTGGCG TGGACACCAT GTTGTTGTCC GATGCCGCAC GCAACCTGCT TTCCAGGTTC
AAATCATCCG CCCCCAAGTC GTCAGCTGGC GGTTACTGA
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| Protein sequence | MKTPVNTFKQ ALQNQQVQIG LWVDLADGLC AELVAGIGYD WLLLDGEHGP SDLRTMLAQL
QGVSSAQGSI PGLATHPIAR VPMGEVAIIK QFLDLGVQTL LVPMVDTAEQ AAQMVRAMRY
PPDGIRGMGS SVARSSRWQG YPNYIQEANE QVCLLVQAET VEAMRNLDAI AATPGVDGVF
IGPADLSASM GFPGNPDHHE VQVAIADSIA RILKVGKAPG IIATTEEQAR KWLAAGALFV
AVGVDTMLLS DAARNLLSRF KSSAPKSSAG GY
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