Gene Rfer_0930 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRfer_0930 
Symbol 
ID3963684 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodoferax ferrireducens T118 
KingdomBacteria 
Replicon accessionNC_007908 
Strand- 
Start bp979439 
End bp980407 
Gene Length969 bp 
Protein Length322 aa 
Translation table11 
GC content65% 
IMG OID637915757 
Productoligopeptide/dipeptide ABC transporter, ATP-binding protein-like 
Protein accessionYP_522208 
Protein GI89899737 
COG category[E] Amino acid transport and metabolism 
COG ID[COG4608] ABC-type oligopeptide transport system, ATPase component 
TIGRFAM ID[TIGR01727] oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCGCGC CACTGATTGA AGTCAAGAAT CTGCACCGCT ACTTTGGCGC GCCAGCCAAG 
CCGGTGCGTG CGGTAGATGA TGTATCCTTT TCCATCCAGC CCGGTGAAAC ACTGGGGCTG 
GTCGGGGAAT CGGGCTCAGG CAAAAGCACC ATTGGCCGCA CGCTGCTGCG GCTGATTGAG 
AGCACCTCGG GCCAGGTGTT GTACCGGGGA GAAGACCTCG GGTCGGCATC AAGTTCCCGC 
ATGCGCGCCC TGCGCAGCAA GCTGCAAATG ATTTTTCAGG ACCCCTACGC CAGCCTGAAC 
CCGAAGATGC GCGTAAAGGA CATTCTGGGG GAGGCCTTGC AGGTGCACGG GCTGGCCAAA 
GGCCGCAAAG TCCGGGATGC GCGCATCGCC GAATTGCTGG AACTGGTTGG CCTGCGCGCC 
GAGCATGCCA GCCGCTATCC GCATGAATTT TCCGGTGGCC AGCGCCAGCG CATCGGCGTG 
GCCCGGGCCC TCGCGGTTGA GCCCGAGTTC ATCGTGGCCG ACGAGCCCCT GTCCGCGCTG 
GACGTGTCGA TACAGGCGCA GGTGGTGAAC CTGCTGTGCG ACCTGCGCGA CCGCCTGTCG 
CTGACCATGC TGTTCATCTC GCATGACCTG GACGTGGTGG AATACCTGTG CGACCGGGTG 
GTGGTGCTGT ACCTGGGCCG CGTGATGGAA GTGGCGCCCA CGGCCGCGCT GTTTGCCCGG 
CCTCTGCATC CCTACAGCCA GGCCCTGCTG GCAGCCTCGC CCAAGCCCGA CCCCGAGCAA 
AAGAGCGAGC GCATTGCGCT CACCGGCGAC ATTCCCAGCC CCGTCAACCC GCCTTCGGGT 
TGCGTGTTTC GTACCCGCTG CCCCCATGTG ATCGACGCCT GCGCCAGCAT CCGTCCCGAG 
TTGCGGGACA TGGGGCAGGG CCGCTTCAAG GCCTGCATCC GGGATGACAT CGCCGTGGTG 
ACGGCGTAA
 
Protein sequence
MSAPLIEVKN LHRYFGAPAK PVRAVDDVSF SIQPGETLGL VGESGSGKST IGRTLLRLIE 
STSGQVLYRG EDLGSASSSR MRALRSKLQM IFQDPYASLN PKMRVKDILG EALQVHGLAK 
GRKVRDARIA ELLELVGLRA EHASRYPHEF SGGQRQRIGV ARALAVEPEF IVADEPLSAL 
DVSIQAQVVN LLCDLRDRLS LTMLFISHDL DVVEYLCDRV VVLYLGRVME VAPTAALFAR 
PLHPYSQALL AASPKPDPEQ KSERIALTGD IPSPVNPPSG CVFRTRCPHV IDACASIRPE 
LRDMGQGRFK ACIRDDIAVV TA