| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_0927 |
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| Symbol | |
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| ID | 3963681 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodoferax ferrireducens T118 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007908 |
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| Strand | - |
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| Start bp | 975621 |
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| End bp | 977120 |
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| Gene Length | 1500 bp |
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| Protein Length | 499 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637915754 |
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| Product | N-acyl-D-amino-acid deacylase |
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| Protein accession | YP_522205 |
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| Protein GI | 89899734 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG3653] N-acyl-D-aspartate/D-glutamate deacylase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACGCGCG CTACCCTGCT TGAGAATGGT CTGGTGATTG ATGGCACGGG TGCCGGCGGC
TGGATCGGCG ATGTGCTGCT GGAGGGCGAC CGGATTGCGG CGCTGGGCAA GGCGCTGCGC
CACCAATTGC CTGAGAGTCT GAGGCTTGAA GAAGTGAGCT GTGTGGATTG CAGCGGTTTG
GCCATCACCC CCGGCTTCAT CGATGTGCAT ACGCACGACG ATGCCATCGT GCTCAATCAC
CCCGACATGC TGCCAAAAAT CTCTCAGGGC ATTACCACCG TCATCACCGG CAATTGTGGC
ATTTCGCTGG CGCCTTTTGT GGTGAAGAAG TCCGAGCCGC CGCTGAATCT GCTCGGTGCC
GATTCATTCC GGTTTGATTC GGTGGAGAGT TATGAGCGCG CCGTAGCGGC CGCACAACCG
GCAGTCAATG TGGCGGTGCT GATTGGTCAC ACCACCTTGC GCTTTGCCTG CGTGGGCGAC
CTGACCCACG CGGCCAGCGC CAGCGAGCTC GACGCCATGT GTGCGTTGCT TACGCACTGC
ATGGAAGACG GCGCGGCGGG CCTGTCGTCG GGTCTTTTTT ATGAACAGGC TTTTGCCGCG
CCTACCGAAG AAGTGGTGCG TCTGGCCCAA GTGGTCTCGC GGTTCGGCGG GGTGTACAGC
ACCCACCTGC GTAGCGAGAT GCAAGCCATC ATTGAAGCGC TTCATGAGGC CGGCGACACG
GCCTTTCTCG CCGGCGTGCC GCTGATCATT TCACACCACA AATGTGCCGG CCCGGCCAAC
TGGGGGCGCA CGCAGGAAAC CTTGCCGCTT ATTGAATCGC TCGCCATCCG CCAGCCCGTG
GCTATGGATG TCTACCCTTA CGTGGCAGGC TCCACCGTGC TGCGCGAGGA TCTCGTCGAT
GGAGTGATCG ACGTGCTCGT GAGCTGGTCC ACTCCGCATC CTGAAATGAC GGGCCGCACT
CTGGCCTCCA TTGCCACCGA GTGGGGCGTT GACCAGAAGG TCGTCTGCCG CCGACTGCAG
CCAGGCGGAG CTTGCTATTT CCAGATGCAC GAGGACGACG TGAAACGCGT CATTGCCCAT
CCCTTGAGCA TGATTGGCTC GGACGGTTTG CCGCACGACC AGCATCCGCA TCCGCGGCTG
TGGGGTGCAT TTCCGCGCGT GCTGGCGCGC TACTGGCGCG ATCAGCAACT CTTTTCGCTG
GAAACAGCCA TTTACAAAAT GACCGGCATG TCGGCCCGCA ATTTCCGTCT GCATCAGCGC
GGGCAGTTGC AGGTGGGCTG GCACGCCGAC GTGGTGGTGC TGGACCCGGC CAGGGTTCGC
GATGTGGCGA CTTACGAAGA ACCGATTGCG CTGTCCGAAG GCATTGAAAA GGTCTTCGTC
AATGGCGCGC TGGCTTATAG TGCAGACGCT GGCGACACCG GTGAAGCCCG GGTGCAGGCG
CGCGCCGGAC GGCTGTTGAA GCGCCTTGCG CCGCACACGC TTGGGGAGCC GGCTCTTTAA
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| Protein sequence | MTRATLLENG LVIDGTGAGG WIGDVLLEGD RIAALGKALR HQLPESLRLE EVSCVDCSGL
AITPGFIDVH THDDAIVLNH PDMLPKISQG ITTVITGNCG ISLAPFVVKK SEPPLNLLGA
DSFRFDSVES YERAVAAAQP AVNVAVLIGH TTLRFACVGD LTHAASASEL DAMCALLTHC
MEDGAAGLSS GLFYEQAFAA PTEEVVRLAQ VVSRFGGVYS THLRSEMQAI IEALHEAGDT
AFLAGVPLII SHHKCAGPAN WGRTQETLPL IESLAIRQPV AMDVYPYVAG STVLREDLVD
GVIDVLVSWS TPHPEMTGRT LASIATEWGV DQKVVCRRLQ PGGACYFQMH EDDVKRVIAH
PLSMIGSDGL PHDQHPHPRL WGAFPRVLAR YWRDQQLFSL ETAIYKMTGM SARNFRLHQR
GQLQVGWHAD VVVLDPARVR DVATYEEPIA LSEGIEKVFV NGALAYSADA GDTGEARVQA
RAGRLLKRLA PHTLGEPAL
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