Gene Rfer_0916 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRfer_0916 
Symbol 
ID3963670 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodoferax ferrireducens T118 
KingdomBacteria 
Replicon accessionNC_007908 
Strand
Start bp960370 
End bp960891 
Gene Length522 bp 
Protein Length173 aa 
Translation table11 
GC content62% 
IMG OID637915744 
Producthypothetical protein 
Protein accessionYP_522195 
Protein GI89899724 
COG category[T] Signal transduction mechanisms 
COG ID[COG0589] Universal stress protein UspA and related nucleotide-binding proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTACCAAC GTATTCTTGT CCCTATCGAC GGCAGCGCCA CGTCCACCCT AGGACTTGAC 
GAGGCTATCA AGCTGGCCAA GCTCACAGGT GCAAGCCTGC GCCTCATTCA CGTCTCGGAC
GCATTGACGT TCGCCACAGG CTTCGAAACC TATGCGGCCT ATGCCGCCGA TGTGATTCCG
CGATTGAAAG AGGCCGGCGA ACAAATTCTC GAGCAGGGCA GAATCCGTGT CGCGGCCAGC
GGCGTCAAGG TTGACACATT GCTCTTGGAC GGCATGGTGA CCCGGGTGTC AGATCTCGTC
GTCGATCAGG CGAAGGCATG GGACGCCGAC CTCATCGTCA TCGGTACCCA TGGCCGCCGC
GGTGTGGGAC GCTGGTTACT GGGCAGTGAC GCGGAGCAGA TTGTTCGCAT GGCACCTGTG
CCGGTGCTGC TGGTTAGGGC GCTAGAAGTT GAAGGTAACG CCGGCGCGAC GGTGCGGGCA
GGCGAAGCCG CCCGGGCTTC GAATCGCGCC GCACCGACTT GA
 
Protein sequence
MYQRILVPID GSATSTLGLD EAIKLAKLTG ASLRLIHVSD ALTFATGFET YAAYAADVIP 
RLKEAGEQIL EQGRIRVAAS GVKVDTLLLD GMVTRVSDLV VDQAKAWDAD LIVIGTHGRR
GVGRWLLGSD AEQIVRMAPV PVLLVRALEV EGNAGATVRA GEAARASNRA APT