Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rfer_0910 |
Symbol | |
ID | 3963626 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodoferax ferrireducens T118 |
Kingdom | Bacteria |
Replicon accession | NC_007908 |
Strand | - |
Start bp | 953987 |
End bp | 954907 |
Gene Length | 921 bp |
Protein Length | 306 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 637915738 |
Product | LysR family transcriptional regulator |
Protein accession | YP_522189 |
Protein GI | 89899718 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGTTTTT TAGATCACAT GCTTGTCTTC TCGAGGGTGG CCGAGCTATT GAGCTTCACC CAGGCGGCAG ACAGCCTTGG GTTGCCCAAA GCCAGCGTGT CGAACGCGGT GCAGCAATTG GAAAACCGGC TTGGCGTGCG CTTGCTGCAC CGGACCACTC GCAAAGTCGT GCTGACTCAC GACGGTCAAT CGTTTTACGA GCGGTGCAAG GATGCCCTGT CCGACATGGA CGAGCTGCAA ACCATGTTTC AACTGCAAAG CTCCAACGCT TTGAAGGGAC GCATCCGGCT GGACATGTCG ACCGTGGTCG CGCGCCAAGC CGTTTTACCG CGACTGCCTG ATTTGCTGCA ACAGCATCCG CAGCTGCAAA TTGAAATCAG CAGCACCGAG CGGCGGGTTG ATCTGGTACG GGAGGGATTC GACTGCGTCG TTCGCGCCGG AAAAGTGACT GAGCCGGGAT TGATTGCGCG GCCCGTCGGT GATTTGCGCA TGGCCAATTG CGTGAGTCCC GGCTACATGG CGCGTTTTGG AGTTCCGCAT TCCTTGGAAG ATCTGGCAAA GCACACACTC GTGCATTACA CCGCGACCCT GGGCGCTAAA GTAAGCGGGT TTGAATGCAC CCAGGTTGGT GAAGAAATTG CCATACCCAT GCAAGGCCCG ATCACGGTGA ACAACGCTGA GGCCTATCAG GCCGCTTGCC TGGCGAGCTT GGGGATTATT CAGGTGCCCT TTGTGGGCGT CCGAGAGTTG ATCGCGCAGG GTCAACTGGT GGAGGTGCTG ACCGGCTGGA CGGCGCCCCC CATGCCCTTG TCGCTGGTGT ATGCCCATCG CCGAAACCTG TCGACCCGCG TGCGCGTTGT CATGGATTGG CTGCACGGCG TGCTGGTGGC CTACCTTGAT GAATCGGGCG TTGGGCAGTG A
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Protein sequence | MSFLDHMLVF SRVAELLSFT QAADSLGLPK ASVSNAVQQL ENRLGVRLLH RTTRKVVLTH DGQSFYERCK DALSDMDELQ TMFQLQSSNA LKGRIRLDMS TVVARQAVLP RLPDLLQQHP QLQIEISSTE RRVDLVREGF DCVVRAGKVT EPGLIARPVG DLRMANCVSP GYMARFGVPH SLEDLAKHTL VHYTATLGAK VSGFECTQVG EEIAIPMQGP ITVNNAEAYQ AACLASLGII QVPFVGVREL IAQGQLVEVL TGWTAPPMPL SLVYAHRRNL STRVRVVMDW LHGVLVAYLD ESGVGQ
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