| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_0907 |
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| Symbol | |
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| ID | 3963623 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodoferax ferrireducens T118 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007908 |
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| Strand | - |
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| Start bp | 949579 |
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| End bp | 951069 |
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| Gene Length | 1491 bp |
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| Protein Length | 496 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 637915735 |
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| Product | EmrB/QacA family drug resistance transporter |
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| Protein accession | YP_522186 |
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| Protein GI | 89899715 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | [TIGR00711] drug resistance transporter, EmrB/QacA subfamily |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGACTCAAT CAACGGCCCT GGAGGCACTC CAGATTCAAT ACGGCCCGCG TTATCGCTGG
CTTCTGCTGT TGACGGTGAT GATTGGCACC GTGGCGTCAA TCATGTCCTC AACGATCATC
AATGTGGCTG TCCCCGACAT GAGCCGCTAC TTTGTGCTGG GGCAGGATCG CATGCAGTGG
GTTTCATCAG GATTCATGGT CGCCATGACC ATCTCGATGC TGACGACGCC GTGGTTACTG
TCGCGCTTTG GTTATCGCAA GACCTACTCA GGTGCTATAT GGTTGCTGTT TGTCGGGGGG
ATTGCCGGCG GGCTGTCCAG CAATTTTGAT CTGGTATTGG TGGCACGGGT GGCCGAGGGT
CTGGCCTCTG GTGTCGTGCA ACCGATCCCA GCCATCATCA TCCTGCGTGC ATTCGCGGCC
GACGAGCAAG GGCGTGCCAG TGGTTTCTTT GGGATGGGTG TGGTGTTGGC TCCGGCCATT
GGCCCCAGCA TCGGCGGGCT GCTGGTTGAC TGGTTTAGCT GGCGTGCCAC CTTCTTCATG
GTGGTGCCGT TTTGTATCGC TTCCTTGTAC ATGGCCCGAC GATTCATTCC GGTGGCCCAC
ATGGGCCAGG AGTCATCCAG CGAAAGCAAG GCGAATTTGG ACTGGTTCGG CCTGCTATTG
GCGACGACAG CCACACTTTG CCTGCTCAAT GGCCTGGTCA CACTTCAAAA CGGTCCGATT
ACCAAATCAG CCGTCTTGCT TTGTGTGTCG TTGGTGTCGT TGCTATCTTT TGTGAAGTGG
CAGCACCGCC TGAGCCACGT CCACAGAGGT CTTCACCAGC AGGCACCGCT GATGAACCTG
GCGCTCTTTG GTCACCGTCA GTTCGCCATG GGAAGTATCG TCTCGTTCAT TTATGGAACG
GCTCTATTCG GTTCAACCTA TTTGCTGCCG GTTTACCTGC AAATGGGCCT TGGAATGTCC
GCCTCGTATG TCGGTACCTT GATGATGCCA GCGGGATTGG TATTGGCTAT CACCATCCCA
ATAGTGGGTC GACTGGCTGA TAAGCGTCCC ACACATATTC TGGTCAGTAT CGGATTAACG
ATGTTAGCTT TGGGGTTCGG TTTGATGGTG ACGGTGGGCC TGCAAACAGC AGTCTGGATC
ATCGCTCTTT GGGTGATTGT GGGTCGTATC GGGCTCGGAT TCATTCTGCC ATCTCTCAAC
CTGGGTTCTA TGAGGGGGTT GTCGAAAAAT CTGATTGCGC AGGGCTCCAG TGTCATTAGC
TTCGTGCGCA TGGTGGGAGG TGCCTTCGGC GTGAGTTTGA GCGCCCTGGT GCTGGAATGG
CGCCTGGAGA CTCATGGCCA ATTACTTTCA CATCCCAATA CCAATCCGGA TCGGCTGACG
GCATTCAACG AATCGTTTCT CATGCTGGCC GGACTATGTG CACTTGCGAT AGTCGCGGCA
TGGCAATTGC GTGGAACAAG TCGACCAATC AAGACGAGAG AAGTGGATTG A
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| Protein sequence | MTQSTALEAL QIQYGPRYRW LLLLTVMIGT VASIMSSTII NVAVPDMSRY FVLGQDRMQW
VSSGFMVAMT ISMLTTPWLL SRFGYRKTYS GAIWLLFVGG IAGGLSSNFD LVLVARVAEG
LASGVVQPIP AIIILRAFAA DEQGRASGFF GMGVVLAPAI GPSIGGLLVD WFSWRATFFM
VVPFCIASLY MARRFIPVAH MGQESSSESK ANLDWFGLLL ATTATLCLLN GLVTLQNGPI
TKSAVLLCVS LVSLLSFVKW QHRLSHVHRG LHQQAPLMNL ALFGHRQFAM GSIVSFIYGT
ALFGSTYLLP VYLQMGLGMS ASYVGTLMMP AGLVLAITIP IVGRLADKRP THILVSIGLT
MLALGFGLMV TVGLQTAVWI IALWVIVGRI GLGFILPSLN LGSMRGLSKN LIAQGSSVIS
FVRMVGGAFG VSLSALVLEW RLETHGQLLS HPNTNPDRLT AFNESFLMLA GLCALAIVAA
WQLRGTSRPI KTREVD
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