Gene Rfer_0901 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRfer_0901 
Symbol 
ID3963617 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodoferax ferrireducens T118 
KingdomBacteria 
Replicon accessionNC_007908 
Strand
Start bp942385 
End bp944547 
Gene Length2163 bp 
Protein Length720 aa 
Translation table11 
GC content60% 
IMG OID637915729 
ProductCheA signal transduction histidine kinases 
Protein accessionYP_522180 
Protein GI89899709 
COG category[N] Cell motility
[T] Signal transduction mechanisms 
COG ID[COG0643] Chemotaxis protein histidine kinase and related kinases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATCTTG ATGACGCACT GCAGACCTTT GTCATCGAGA GCCGCGAGCT GCTTGAAGGT 
ATGGAAGACG CGCTGCTCGC CATTGAGCAG GCCGAGGAAA AAGACGAACT GGTGAACGCC
ATATTTCGAA CGGCGCACAC CATCAAGGGT TCAGCAGGTC TGTTCGGGCT GGACCACATC
GTCGCCTTCA CCCATGTGGG GGAAAGCGTG CTGGATCAAG TGCGCGCTAA CAAGCTCCAA
ATTGCCGACC AGTTGGTCGT GTTGCTGCTG TCATGCCGCG ACCATATCGC CGCGCTGATC
GAAGCGGTAG CGGCGGGCCA GATCGAGCCC GATGCCGAGC TGCAGCAGCA AGGCGAGCCG
CTGCTGGTGC AGTTGCGCGG CTACCTGGCG CCGCCAGCGG CAACAACTCC CGCCAGCACC
CAAGTCACCA CCGGTATGAC CCCGGGCATC GACCCGATTC AGCGCATTAA CGGCAACACG
GGGGTGGATC ACTGGCACAT CTCCTTGCGC TTTGGCCCCG ATGTGCTCAA GAACGGCATG
GACCCACTGT CCTTTATCGG CTACCTGCAA ACGCTGGGGA AAATTTCCGG CATCGCCACC
TTGCCCGATG CGATTCCGAG CGCTGACCTG ATGGATCCCG AGACCTGTTA CCTCGGCTTT
GAAATTGCGC TACAGAGCGA AGCCGACAAG GCGACGATCG AGAACGTGTT TGAGTTTGTG
CGCGATGACT GTCGCCTGCG TATTTTGCCG CCGCACAGCC TGATCGCCGA CTACATCAAC
CTGATCAACG AGCATCCAGG CGATGTGGCG CGCGTGGGTG AAATGCTGGT GCGCTGTGGC
ACCCTCACCG CGCAAGAGCT CGACACTGCG CTCAACACGC AAGCTGATAC CCCGGCCAAG
CCGATCGGCA CCATCTTGAT CGAACAAGGC TCGGTGCGCC CAGAGGTGAT GGACGCAGCT
CTCACCAAAC AAAAGCAGGT CAAGGAGCTT GGCACGGTCG AGAGTCGCTC GATCCGGGTC
GATGCCGACA AGCTCGACCA GCTCATCAAC CTGGTGGGAG AGCTGATCAT CGTTGGCGCA
GGCGTCAACC TGATCGCCGC GCGGGTCAAG ATTGCCGAGT TGCAGGAGGC GACTTCCAAG
CTCTCGGGCT TGGTCGAAGA GGTGCGCGAC AGCGCACTGC AACTGCGCAT GGTCAAGATT
GGCGCCACCT TTAACCGCTT TCAGCGCGTG GTGCATGACG TGTCACGCGA CTTGGGCAAA
GACGTGACGC TGGTCATCAA AGGCGAAGAC ACTGAGCTCG ACAAAACCGT GGTCGAGAAA
ATTGGCGATC CGCTGATGCA CCTGGTTCGC AACTCGATGG ATCACGGCAT TGAGTCGGCT
GAGGTACGTG CCCAGCGCGG CAAACCAGCC CAAGGAACGC TCACGCTGAA CGCCTGTCAC
GATTCGGGCA GCATTGTCAT CAGCGTGCAG GATGACGGTG GCGGCCTGCA TCGCGAACGC
ATCCTGGCTA AGGCAACCGA GCGTGGGCTG GTAGAACCGG GGCATCACAT GAGCGATGCC
GAGGTTTATG CACTGATCTT TGAGCCCGGC TTCTCCACCG CTGAGAAGGT CAGCAACTTG
TCCGGCCGCG GTGTCGGGTT GGATGTGGTG AAACGCAACA TCACGGCGCT GCGCGGCACC
GTCAGCATCG ACAGCACAGA GGGCGTCGGC ACGACGGTGA CGGTGCGCTT GCCGCTCACG
CTGGCCATCA TCGACGGCTT TTTGGTTGAA GTGGGCAAGT CGGTGTTTGC TATTCCCTTG
GACATGATCG AGGAATGCGT CGCCTATAGC GCCGAGCCGG GACACGATTA CACCAACCTT
CGTGGCCAGG TCCTGCCCTT CATCCGGCTG CGTGAGCTGT TCAACGTGGC CGAGCCGATC
ACCCGGCGCG AAAACATTGT GGTACTCAAA CACGCCGGGC AAAAAGCCGG GTTAGTGGTT
GACACACTGC TGGGCGAGTT CCAGACCGTC ATCAAGCCGC TGGCCAAGAT GTTCAACCAG
GTCAAGTGCG TCAGCGGTTC CACCATTTTG GGCAGTGGCG AAGTGGCGCT GATTCTGGAT
GTGCCGCAGC TGGTGCAACA AGCCTCGGTC AACAACTCCA ACGCAAGCGC CTGGGCTGGC
TGA
 
Protein sequence
MNLDDALQTF VIESRELLEG MEDALLAIEQ AEEKDELVNA IFRTAHTIKG SAGLFGLDHI 
VAFTHVGESV LDQVRANKLQ IADQLVVLLL SCRDHIAALI EAVAAGQIEP DAELQQQGEP
LLVQLRGYLA PPAATTPAST QVTTGMTPGI DPIQRINGNT GVDHWHISLR FGPDVLKNGM
DPLSFIGYLQ TLGKISGIAT LPDAIPSADL MDPETCYLGF EIALQSEADK ATIENVFEFV
RDDCRLRILP PHSLIADYIN LINEHPGDVA RVGEMLVRCG TLTAQELDTA LNTQADTPAK
PIGTILIEQG SVRPEVMDAA LTKQKQVKEL GTVESRSIRV DADKLDQLIN LVGELIIVGA
GVNLIAARVK IAELQEATSK LSGLVEEVRD SALQLRMVKI GATFNRFQRV VHDVSRDLGK
DVTLVIKGED TELDKTVVEK IGDPLMHLVR NSMDHGIESA EVRAQRGKPA QGTLTLNACH
DSGSIVISVQ DDGGGLHRER ILAKATERGL VEPGHHMSDA EVYALIFEPG FSTAEKVSNL
SGRGVGLDVV KRNITALRGT VSIDSTEGVG TTVTVRLPLT LAIIDGFLVE VGKSVFAIPL
DMIEECVAYS AEPGHDYTNL RGQVLPFIRL RELFNVAEPI TRRENIVVLK HAGQKAGLVV
DTLLGEFQTV IKPLAKMFNQ VKCVSGSTIL GSGEVALILD VPQLVQQASV NNSNASAWAG