Gene Rfer_0885 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRfer_0885 
Symbol 
ID3963659 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodoferax ferrireducens T118 
KingdomBacteria 
Replicon accessionNC_007908 
Strand
Start bp925245 
End bp926639 
Gene Length1395 bp 
Protein Length464 aa 
Translation table11 
GC content63% 
IMG OID637915713 
ProductBFD-like (2Fe-2S)-binding protein 
Protein accessionYP_522164 
Protein GI89899693 
COG category[R] General function prediction only 
COG ID[COG0446] Uncharacterized NAD(FAD)-dependent dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAAAT CATTGCTACA ACCCGTGGTC GTTGGCGCAG GCCCGGCCGG TGTCCGCGCT 
GCGCAAACCC TGGTGGCGTA TGGTGTGCGC CCAGTGGTGG TGGACGAAGC GCCTCGTGCC
GGCGGTCAGA TTTACCGCCG ACCTCCAAGC AACTTCAAGC GGCCGGCGCA GACCTTATAT
GGCTTTGAGG CAGCCCGTGC CTTGGCCGTG CACAGCACCT TCGACACGCT CACCAACCAG
ATCGATTACC GCCCGGATAG CCTGGTGTGG AACGCTCAGA GTGGATTGCT GGATGTGCTT
CACGGCCCGA CTCAAACCAC ACAGCGCCTG CCTTACCAGC AACTGATCGT GGCCACCGGC
GCCACCGATC GCGTGTTACC CATTCCCGGC TGGACCTTGC CCGGTGTCTA CACCCTGGGC
GGCGCCCAAG TCGCGCTCAA ATTCCAGGGC TGTGCGATTG GCCGCCAGGT GGTGTTCATG
GGCACCGGCC CACTGCTGTA TCTGGTGGCT TACCAATATG CCAAGGCCGG TGTCAATGTG
GCAGCCGTGC TGGACACAGC AAGACTCAGC GACCAACTGT CCGCCATGCC CGCCCTGTTG
ACGCAGCCTG CCGTTTTGTT CAAGGGTATG TATTACGTGG CCTGGCTGCG CGCGCAGGGT
GTGGTGCTGC ACAGCGGTGT GCGCCCGTTG CATGTCCTTG GCCAAACGCG GGTGCAGGCA
GTGGTATGGC ATGACGGCGA AAAGGAACTC ACGCTGGCTT GCGACGCGAT CGGCTTCGGC
TACGCCTTGC GCTCCGAGAC TCAATTAGCC GACTTGCTGG GCTGCCAATT TGCCTTTGAT
CCACTTCAGC GGTCCCATTT GCCAGAGCGC GACGGCGCAG GCCGCGCTAG CGTTGCAGGG
GTCTACCTGG CAGGAGATGG CGCAGGCATC ATGGGGGCCG ACGCAGCCGA ATGGGCTGGT
GAGCTTGCCG CACTGGCCTT GCTGACAGAC AACGGTGTCG CCGTCGACAG CGCCCGGGCC
CGGGTACTGG AACAAAAACT GCGTCAATTG CGGCGTTTTC GAACTGGCCT GGAGCGGGCT
TTCCCGTTTC CGCAAAACTG GGCCGCCCAG GCACCCGACG ATCTGGTGGT GTGCCGTTGC
GAAAACATCA CTGCCGGCGA ATTGCGCCGC ACGGCGCAGA CCAGCGGTGC AGATGAATTG
AACCGACTCA AAGCCCTGAC CCGTGTCGGC ATGGGCCGCT GCCAGGGTCG CATATGTGGC
GTGGCGGCGG CAGAAATCCT GGCGCAGGCT ACCGGTCAGT CCGTCGAGCA GGTCGGCCGC
CTGCGCGGGC AGGCCCCCAT CAAACCGATT CCCATCCATC TTGTGCACGC GTCAGCACCA
GGAGTCAATG CATGA
 
Protein sequence
MKKSLLQPVV VGAGPAGVRA AQTLVAYGVR PVVVDEAPRA GGQIYRRPPS NFKRPAQTLY 
GFEAARALAV HSTFDTLTNQ IDYRPDSLVW NAQSGLLDVL HGPTQTTQRL PYQQLIVATG
ATDRVLPIPG WTLPGVYTLG GAQVALKFQG CAIGRQVVFM GTGPLLYLVA YQYAKAGVNV
AAVLDTARLS DQLSAMPALL TQPAVLFKGM YYVAWLRAQG VVLHSGVRPL HVLGQTRVQA
VVWHDGEKEL TLACDAIGFG YALRSETQLA DLLGCQFAFD PLQRSHLPER DGAGRASVAG
VYLAGDGAGI MGADAAEWAG ELAALALLTD NGVAVDSARA RVLEQKLRQL RRFRTGLERA
FPFPQNWAAQ APDDLVVCRC ENITAGELRR TAQTSGADEL NRLKALTRVG MGRCQGRICG
VAAAEILAQA TGQSVEQVGR LRGQAPIKPI PIHLVHASAP GVNA