Gene Rfer_0869 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRfer_0869 
Symbol 
ID3963780 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodoferax ferrireducens T118 
KingdomBacteria 
Replicon accessionNC_007908 
Strand
Start bp906716 
End bp908365 
Gene Length1650 bp 
Protein Length549 aa 
Translation table11 
GC content68% 
IMG OID637915697 
Producthypothetical protein 
Protein accessionYP_522148 
Protein GI89899677 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1984] Allophanate hydrolase subunit 2
[COG2049] Allophanate hydrolase subunit 1 
TIGRFAM ID[TIGR00370] conserved hypothetical protein TIGR00370
[TIGR00724] biotin-dependent carboxylase uncharacterized domain 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATGCGTT TCCTGCCGAT CAACTTGAAC GCCCTGCTGG TGGAGCTGGA CAACCTGGAG 
CAAACGCTGG CCCTGCTGGC CTCGCTCAAG AACGAGCCGA TCGCCGGCGT TGAAGAGCTG
GTGCCTGCGG CCCGCACCAT TCTGATCAGT TGGCGTCCGA CCGCCTGCTC CAGGGCAGAC
CTGGTGCGCG AAATCAGCCA GCGTGATGTC AGCGCCCGCG CCCAGCGCGG CGGCACGCTG
ATCGAGATTC CCGTGCATTA CAACGGCGAG GACCTGGCCG ATGTGGCCCA GCTGCTGGGC
ATCACGCCCG AAGAAGTCAT CCGCCGTCAC ACCGGCAGCG AGTACACGGT GGCCTTCACC
GGTTTTGCGC CGGGTTTTGC GTACCTGAGC GGCGGCCACC CCAGCTTCAA CGTGCCGCGC
CGCAGCACCC CGCGCACCCG CATTCCGGCC GGGGCGGTCG GACTGGCGGG CACGTTCAGC
GGCGTCTATC CCCAGGCCAG CCCGGGCGGC TGGCAGATCA TTGGCGTCAC GCCGACGGCG
ATGTGGGACC TGGCGCGTGA CGTGCCCGCG CTGCTGCAGC CCGGCTACCG GGTTCGGTTC
GTGAATATTG CTACTATTTC AATAGCTGAA GAAGCAGTAT TTACGGGGGC TAGAGGCCAA
AAACAATTGG ATACTTTGCC CCCCCAAGGC CCCACCCCGG ACCTTGGCAG CGCCGCGCTG
GAAATCCAGT CCCCCGGCCT GCAGACCCTG TTTCAGGATC TGGGCCGCAG CGGCCAGGCC
GGGCAAGGCG TGTCGGCCTC CGGCGCCATG GATCAGGCCG CGCTCAAGGC CGCCAACCGC
CTGGTCGGCA ATGCCTCCAA CAGCGCCTGC CTGGAAACCG CCAGCGGCGG CCTGCGCCTG
CGCAGCCGGG GCGACACGGT GGTGGCCGTG ACCGGGGCCG ATGCGCCCCT CACCGTCACC
AGCGCCAACG GCACCCATTG GCAGGCCGAG CGTTACCAGC CTGTCGCGCT GGCCGATGGC
GACACGCTGG CCATCGGCCA GCCGCAGGCG GGCATTCGCA CCTACCTGGC CGTGCGCGGC
GGTTTTGCCG TGCCGCCGGT GCTGGGCAGC TGTTCGACCG ACACGCTGGC CCATGTCGGC
CCCCCGCCGC TGGCCGTCGG CGATGTGCTG CCGATCCGGC CCGTTCATCA TGGAGCGGTG
GTGGGCCTGC GCGAGGAGCC GCCCGCCGAC CTGCCCACGA CGCAGGAGGT GGTCACGCTG
GACGTGGTGC TGGGGCCGCG CACGGACTGG TTCACGGCCG AGTCGATTGA GCGCTTGCGC
AGCCAGCTAT GGCAAGTGAC ACCGCAGTCC AACCGCGTCG GCCTGCGTTT GGCGGGCGAA
GTGGCGCTGG AGCGGGCCGT GCCGGACGAA TTACCCAGCG AAGGCACCGC GTGGGGTGCG
ATTCAGGTTC CGCCAAGCGG CCAGCCGGTG CTGTTTCTGG CCGACCATCC GCTCACCGGC
GGCTATCCCG TGATCGGCTG CGTCGCCACC TACCACCTGA ACCGGGCCGG ACAGATTCCG
GTCAATGCCT GGGTGCGTTT CAACCCCATT CGTGACTTTG AACCGTCCAC CGCTGTGGCC
CGCGACACCG CCTCACCAAC CGAACACTGA
 
Protein sequence
MMRFLPINLN ALLVELDNLE QTLALLASLK NEPIAGVEEL VPAARTILIS WRPTACSRAD 
LVREISQRDV SARAQRGGTL IEIPVHYNGE DLADVAQLLG ITPEEVIRRH TGSEYTVAFT
GFAPGFAYLS GGHPSFNVPR RSTPRTRIPA GAVGLAGTFS GVYPQASPGG WQIIGVTPTA
MWDLARDVPA LLQPGYRVRF VNIATISIAE EAVFTGARGQ KQLDTLPPQG PTPDLGSAAL
EIQSPGLQTL FQDLGRSGQA GQGVSASGAM DQAALKAANR LVGNASNSAC LETASGGLRL
RSRGDTVVAV TGADAPLTVT SANGTHWQAE RYQPVALADG DTLAIGQPQA GIRTYLAVRG
GFAVPPVLGS CSTDTLAHVG PPPLAVGDVL PIRPVHHGAV VGLREEPPAD LPTTQEVVTL
DVVLGPRTDW FTAESIERLR SQLWQVTPQS NRVGLRLAGE VALERAVPDE LPSEGTAWGA
IQVPPSGQPV LFLADHPLTG GYPVIGCVAT YHLNRAGQIP VNAWVRFNPI RDFEPSTAVA
RDTASPTEH