Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rfer_0869 |
Symbol | |
ID | 3963780 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodoferax ferrireducens T118 |
Kingdom | Bacteria |
Replicon accession | NC_007908 |
Strand | - |
Start bp | 906716 |
End bp | 908365 |
Gene Length | 1650 bp |
Protein Length | 549 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 637915697 |
Product | hypothetical protein |
Protein accession | YP_522148 |
Protein GI | 89899677 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1984] Allophanate hydrolase subunit 2 [COG2049] Allophanate hydrolase subunit 1 |
TIGRFAM ID | [TIGR00370] conserved hypothetical protein TIGR00370 [TIGR00724] biotin-dependent carboxylase uncharacterized domain |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATGCGTT TCCTGCCGAT CAACTTGAAC GCCCTGCTGG TGGAGCTGGA CAACCTGGAG CAAACGCTGG CCCTGCTGGC CTCGCTCAAG AACGAGCCGA TCGCCGGCGT TGAAGAGCTG GTGCCTGCGG CCCGCACCAT TCTGATCAGT TGGCGTCCGA CCGCCTGCTC CAGGGCAGAC CTGGTGCGCG AAATCAGCCA GCGTGATGTC AGCGCCCGCG CCCAGCGCGG CGGCACGCTG ATCGAGATTC CCGTGCATTA CAACGGCGAG GACCTGGCCG ATGTGGCCCA GCTGCTGGGC ATCACGCCCG AAGAAGTCAT CCGCCGTCAC ACCGGCAGCG AGTACACGGT GGCCTTCACC GGTTTTGCGC CGGGTTTTGC GTACCTGAGC GGCGGCCACC CCAGCTTCAA CGTGCCGCGC CGCAGCACCC CGCGCACCCG CATTCCGGCC GGGGCGGTCG GACTGGCGGG CACGTTCAGC GGCGTCTATC CCCAGGCCAG CCCGGGCGGC TGGCAGATCA TTGGCGTCAC GCCGACGGCG ATGTGGGACC TGGCGCGTGA CGTGCCCGCG CTGCTGCAGC CCGGCTACCG GGTTCGGTTC GTGAATATTG CTACTATTTC AATAGCTGAA GAAGCAGTAT TTACGGGGGC TAGAGGCCAA AAACAATTGG ATACTTTGCC CCCCCAAGGC CCCACCCCGG ACCTTGGCAG CGCCGCGCTG GAAATCCAGT CCCCCGGCCT GCAGACCCTG TTTCAGGATC TGGGCCGCAG CGGCCAGGCC GGGCAAGGCG TGTCGGCCTC CGGCGCCATG GATCAGGCCG CGCTCAAGGC CGCCAACCGC CTGGTCGGCA ATGCCTCCAA CAGCGCCTGC CTGGAAACCG CCAGCGGCGG CCTGCGCCTG CGCAGCCGGG GCGACACGGT GGTGGCCGTG ACCGGGGCCG ATGCGCCCCT CACCGTCACC AGCGCCAACG GCACCCATTG GCAGGCCGAG CGTTACCAGC CTGTCGCGCT GGCCGATGGC GACACGCTGG CCATCGGCCA GCCGCAGGCG GGCATTCGCA CCTACCTGGC CGTGCGCGGC GGTTTTGCCG TGCCGCCGGT GCTGGGCAGC TGTTCGACCG ACACGCTGGC CCATGTCGGC CCCCCGCCGC TGGCCGTCGG CGATGTGCTG CCGATCCGGC CCGTTCATCA TGGAGCGGTG GTGGGCCTGC GCGAGGAGCC GCCCGCCGAC CTGCCCACGA CGCAGGAGGT GGTCACGCTG GACGTGGTGC TGGGGCCGCG CACGGACTGG TTCACGGCCG AGTCGATTGA GCGCTTGCGC AGCCAGCTAT GGCAAGTGAC ACCGCAGTCC AACCGCGTCG GCCTGCGTTT GGCGGGCGAA GTGGCGCTGG AGCGGGCCGT GCCGGACGAA TTACCCAGCG AAGGCACCGC GTGGGGTGCG ATTCAGGTTC CGCCAAGCGG CCAGCCGGTG CTGTTTCTGG CCGACCATCC GCTCACCGGC GGCTATCCCG TGATCGGCTG CGTCGCCACC TACCACCTGA ACCGGGCCGG ACAGATTCCG GTCAATGCCT GGGTGCGTTT CAACCCCATT CGTGACTTTG AACCGTCCAC CGCTGTGGCC CGCGACACCG CCTCACCAAC CGAACACTGA
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Protein sequence | MMRFLPINLN ALLVELDNLE QTLALLASLK NEPIAGVEEL VPAARTILIS WRPTACSRAD LVREISQRDV SARAQRGGTL IEIPVHYNGE DLADVAQLLG ITPEEVIRRH TGSEYTVAFT GFAPGFAYLS GGHPSFNVPR RSTPRTRIPA GAVGLAGTFS GVYPQASPGG WQIIGVTPTA MWDLARDVPA LLQPGYRVRF VNIATISIAE EAVFTGARGQ KQLDTLPPQG PTPDLGSAAL EIQSPGLQTL FQDLGRSGQA GQGVSASGAM DQAALKAANR LVGNASNSAC LETASGGLRL RSRGDTVVAV TGADAPLTVT SANGTHWQAE RYQPVALADG DTLAIGQPQA GIRTYLAVRG GFAVPPVLGS CSTDTLAHVG PPPLAVGDVL PIRPVHHGAV VGLREEPPAD LPTTQEVVTL DVVLGPRTDW FTAESIERLR SQLWQVTPQS NRVGLRLAGE VALERAVPDE LPSEGTAWGA IQVPPSGQPV LFLADHPLTG GYPVIGCVAT YHLNRAGQIP VNAWVRFNPI RDFEPSTAVA RDTASPTEH
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