| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_0861 |
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| Symbol | |
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| ID | 3963772 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodoferax ferrireducens T118 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007908 |
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| Strand | - |
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| Start bp | 898607 |
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| End bp | 899599 |
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| Gene Length | 993 bp |
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| Protein Length | 330 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 637915689 |
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| Product | secretion protein HlyD |
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| Protein accession | YP_522140 |
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| Protein GI | 89899669 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1566] Multidrug resistance efflux pump |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.0209949 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCTCAC GGACTCGGAA AATCCTGGCG ATAGCTGCCC TGTTGACGCT GGTTCTGTTA
GCGACCGTTT GGCGAACGCA GTTGCTGGCG CTCTTGAAAG CCAAGGACGA AACCAATGTC
TTGAGTCTGT CCGGCAATAT CGAAGCCCAT GAGAGCGTGC TTGGCTTTAA GACCGTGCAG
TCTCGCATCG TCGAACTCCC CTTCCATGAG GGCCAGTGGG TCAGCAAGGG GACGGTGCTC
GCCGTCGTCG ACGACGCCGA CTATCGGCAA CAAATGGCAA TCGCTGAAAG TAACCTGGCG
GTTCAAAAAC AGCAACTCGA AGCAGCGCGT CAAAACCTTT ATACGGCGGA GCGTACGTTG
CTGGTTGATC AGGCGGAAGT CAGGCAGCGC CAGCTTGACC AGCAACGTGC GCTGGATCTG
CAACAGCAGG GGTTTACCTC GAAGGCGACG CTGGACCAGG CTGACACAGC GCTGAAACAA
GCCAGTGCGG TGCTACAGCG AGACCAGTCG CTGCAGACCG CAGCGGCGCG AGCCATAGAC
GTCGCCAAAG CCAGCGTACA TAGCGGTGAA GCCGCGGTCG CGCTGGCACG CATCGTTCTG
AGTTACACGA CACTGAGGGC GCCGTTCGAC GGGGTCGTGA ACGTGCAGCA GGCCGAGGTC
GGCGAGATCG TGGTGCCTGG CACGCCGGTG CTGACGCTGG CCGACCTTGA CCACGTCTGG
TTGCGCGCTT ACCTGAATGA ATCCGACTTG GGTCGCGTGC GAATGGGTCA GGAGGTGAGC
GTCAGCAACG ACAGTGATCC AAACAGGCGC TACCAAGGTC GCATCAGCTT CATTTCAGAG
AAGGCGGAAT TCACACCCAA GAGCGTCGAG ACCCACGCCG AGAGGGTGAA CTTGGTCTAT
CGGATCAAGA TCGATATTGC CAATCCAGAA CATGAACTCG TTCCCGGGAT GCCGGCAGAC
GCACGCATCG CATTGCACAC AGCGGGATCC TGA
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| Protein sequence | MTSRTRKILA IAALLTLVLL ATVWRTQLLA LLKAKDETNV LSLSGNIEAH ESVLGFKTVQ
SRIVELPFHE GQWVSKGTVL AVVDDADYRQ QMAIAESNLA VQKQQLEAAR QNLYTAERTL
LVDQAEVRQR QLDQQRALDL QQQGFTSKAT LDQADTALKQ ASAVLQRDQS LQTAAARAID
VAKASVHSGE AAVALARIVL SYTTLRAPFD GVVNVQQAEV GEIVVPGTPV LTLADLDHVW
LRAYLNESDL GRVRMGQEVS VSNDSDPNRR YQGRISFISE KAEFTPKSVE THAERVNLVY
RIKIDIANPE HELVPGMPAD ARIALHTAGS
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