| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_0859 |
|---|
| Symbol | |
|---|
| ID | 3963770 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodoferax ferrireducens T118 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007908 |
|---|
| Strand | - |
|---|
| Start bp | 896701 |
|---|
| End bp | 897660 |
|---|
| Gene Length | 960 bp |
|---|
| Protein Length | 319 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 637915687 |
|---|
| Product | ABC transporter related |
|---|
| Protein accession | YP_522138 |
|---|
| Protein GI | 89899667 |
|---|
| COG category | [V] Defense mechanisms |
|---|
| COG ID | [COG1131] ABC-type multidrug transport system, ATPase component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.0838587 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCAGAACG ACACCCAGGC ACAGATCGTG GTCGACGCCC TGGTCAAGCG CTTCGGCAGC
TTTGTCGCCG TCGACGGCGT GAGCTTCGAG GTCGGACGCG GCGAGGTCAT GGGCTTCATC
GGTCCCAATG GTGCCGGCAA GTCCACGCTG ATCCGCATCC TGTGCGGCCT GTTGCGCCCC
AGCGCCGGGC GCGCGCTGGT CGCCGGCATC GACGTTGCGC AGGATCCCGA AGGCGTGCGT
CGACGCATCG GCTACATGTC GCAAAAGTTC TCGCTCTACA ACGACATGAG CGTGGTCGAG
AACCTGCGCT TCTTCGGCGG CGTCTATGGT GTGTCGCGCG CCGACATCAG CGCGCGTCTG
CGCTTTGCCG TCGATATGGC GGGGCTCACC GGGCGCGAGG ACGCGCTTGT GGCGACGCTG
GCGGGCGGCT GGAAGCAGCG CCTGGCGCTG GGTGCAGCGA TCCTGCACCG GCCCACGATC
CTGTTTCTGG ATGAACCGAC TTCGGGCGTG GATCCCAGTT CGCGTCGGCG CTTCTGGGAA
CTGATCCACG CGCTGGCGCA GGACGGCGTC AGTGTGCTGG TAAGCACGCA CTACATGGAC
GAGGCCGAAT ACTGCCACCG CGTCGCGCTG ATTAACCACG GTCGCCTCAT CGCTTTGGGA
ACGCCGCTGG AACTGCGCCA GCATGCGCTG GGCGGTGAGC TGCTGGTCAT AGAGGGCAAC
AGCATTGGGG ACGCCATGAC CCAAATTGGA CAGGCGCCGG GCGTGCTCGA CGTGGCGATA
TTCGGCAGTG TCCTGCACGC ATTGGTTGAT CAAGCCGCAT TGCGTTCCCC CGAGTTGCTG
GAATTGCTGA CGACCACGGG CAGGACTGAC GTGCGGATGC GTCGCATAGC CCCGTCGCTG
GAAGACAGTT TTGTGCATCT GGTCAGAGCC AGCGCTGCTA CTGCGGGAGC TGCAGCGTGA
|
|---|
| Protein sequence | MQNDTQAQIV VDALVKRFGS FVAVDGVSFE VGRGEVMGFI GPNGAGKSTL IRILCGLLRP
SAGRALVAGI DVAQDPEGVR RRIGYMSQKF SLYNDMSVVE NLRFFGGVYG VSRADISARL
RFAVDMAGLT GREDALVATL AGGWKQRLAL GAAILHRPTI LFLDEPTSGV DPSSRRRFWE
LIHALAQDGV SVLVSTHYMD EAEYCHRVAL INHGRLIALG TPLELRQHAL GGELLVIEGN
SIGDAMTQIG QAPGVLDVAI FGSVLHALVD QAALRSPELL ELLTTTGRTD VRMRRIAPSL
EDSFVHLVRA SAATAGAAA
|
|---|
| |