Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rfer_0858 |
Symbol | |
ID | 3963769 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodoferax ferrireducens T118 |
Kingdom | Bacteria |
Replicon accession | NC_007908 |
Strand | - |
Start bp | 895568 |
End bp | 896704 |
Gene Length | 1137 bp |
Protein Length | 378 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 637915686 |
Product | hypothetical protein |
Protein accession | YP_522137 |
Protein GI | 89899666 |
COG category | [V] Defense mechanisms |
COG ID | [COG0842] ABC-type multidrug transport system, permease component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.137935 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGAAGTGGC GGCGTGTCAA GGCGATCGTC GTTAAGGAGA GCCTGCAGAT CGTTCGCGAT CCCCGCAGCC TCATGATCGC GCTGCTGATT CCCTTGCTGC AGATGTTCCT GCTGGGCTAC GGCATCAGCC TGGATATCAA GCAGATTCCG TTGTGCGCCT ATGACAACGA AGGCAGCCAG ACATCGCAGG ATTTGCTGCG GCGCTTTTCG GCGTCACCCT ATTTTTCGCT GCAGGGCCAG GCCACCAGTT ATGCCGAGGT GGGGCGCAGT CTGGACGATG GCCGCTGCAG CATCGCCATC GTGATCCCGT CCGGATTCTC CAAGAGACTG AACGACACCG GGCAGGGCCT GGTGCAGGCG CTGCTGGACG CGACCGACAC CAACAACGCC AGCCTGGCCG CCGGCTACGC CAGCGCTGTG ATCGCCAGCT ATTCCGCCGC CGTCCAGCTC CAGACCATCG AGCAAAGAGG CGCCAGCGTG CAGACGCTCA CGCCGGTGGA GGTGCGCGCG CGCGTCTGGT TCAACGAAGA CATGGTGAGC CGCAACTTCA TCATCCCGGG GGTCGTGGCC CTGGTCATGG CCATCATCGG CTCGCAGCTG TCATCGCTCA CCATCGCACG CGAATGGGAG CGCGGAACGA TGGAACTGCT GGTGTCGACC CCGATACAGC CGTTGGAACT GATGCTGGGC AAGCTTCTGC CATATTTCGT GGTGGGAATG GTCGACGCCT GCATCTGCCT GGCGCTGGCG GTGTTCTGGT TTGAGGTGCC GTTTCGCGGC ACGCTGTCGG CGCTATTCTT CACCACCGGC CTGTTTCTCA CGGTGGTGCT GTGCATCGGC TACTACGTCT CGGTGTCGAT CCGCAGCCAG GTCGGAGCCA GTCAGGTCGC GTTGTTGCTC ACCATGCTGC CCACGACACT GCTGTCGGGC TTCTCTTTCC CCATCGACCA GATGCCGACC GCAGTCCAGG CCGTCACATA CATCGTGAGC GGCCGCTACT ACGTGACGAT CCTGAAGGCG CTTTTTCTCA AGGGCGCGCC CTGGGGCGAA CTGGCACTGC CGATTTTCTG TCTGGCGCTG TATGCGGCGG CGATGGTGCT GCTGGCGGCC CGCGCTTTCC GAAAAACCCT GGATTGA
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Protein sequence | MKWRRVKAIV VKESLQIVRD PRSLMIALLI PLLQMFLLGY GISLDIKQIP LCAYDNEGSQ TSQDLLRRFS ASPYFSLQGQ ATSYAEVGRS LDDGRCSIAI VIPSGFSKRL NDTGQGLVQA LLDATDTNNA SLAAGYASAV IASYSAAVQL QTIEQRGASV QTLTPVEVRA RVWFNEDMVS RNFIIPGVVA LVMAIIGSQL SSLTIAREWE RGTMELLVST PIQPLELMLG KLLPYFVVGM VDACICLALA VFWFEVPFRG TLSALFFTTG LFLTVVLCIG YYVSVSIRSQ VGASQVALLL TMLPTTLLSG FSFPIDQMPT AVQAVTYIVS GRYYVTILKA LFLKGAPWGE LALPIFCLAL YAAAMVLLAA RAFRKTLD
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