Gene Rfer_0858 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRfer_0858 
Symbol 
ID3963769 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodoferax ferrireducens T118 
KingdomBacteria 
Replicon accessionNC_007908 
Strand
Start bp895568 
End bp896704 
Gene Length1137 bp 
Protein Length378 aa 
Translation table11 
GC content62% 
IMG OID637915686 
Producthypothetical protein 
Protein accessionYP_522137 
Protein GI89899666 
COG category[V] Defense mechanisms 
COG ID[COG0842] ABC-type multidrug transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.137935 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAAGTGGC GGCGTGTCAA GGCGATCGTC GTTAAGGAGA GCCTGCAGAT CGTTCGCGAT 
CCCCGCAGCC TCATGATCGC GCTGCTGATT CCCTTGCTGC AGATGTTCCT GCTGGGCTAC
GGCATCAGCC TGGATATCAA GCAGATTCCG TTGTGCGCCT ATGACAACGA AGGCAGCCAG
ACATCGCAGG ATTTGCTGCG GCGCTTTTCG GCGTCACCCT ATTTTTCGCT GCAGGGCCAG
GCCACCAGTT ATGCCGAGGT GGGGCGCAGT CTGGACGATG GCCGCTGCAG CATCGCCATC
GTGATCCCGT CCGGATTCTC CAAGAGACTG AACGACACCG GGCAGGGCCT GGTGCAGGCG
CTGCTGGACG CGACCGACAC CAACAACGCC AGCCTGGCCG CCGGCTACGC CAGCGCTGTG
ATCGCCAGCT ATTCCGCCGC CGTCCAGCTC CAGACCATCG AGCAAAGAGG CGCCAGCGTG
CAGACGCTCA CGCCGGTGGA GGTGCGCGCG CGCGTCTGGT TCAACGAAGA CATGGTGAGC
CGCAACTTCA TCATCCCGGG GGTCGTGGCC CTGGTCATGG CCATCATCGG CTCGCAGCTG
TCATCGCTCA CCATCGCACG CGAATGGGAG CGCGGAACGA TGGAACTGCT GGTGTCGACC
CCGATACAGC CGTTGGAACT GATGCTGGGC AAGCTTCTGC CATATTTCGT GGTGGGAATG
GTCGACGCCT GCATCTGCCT GGCGCTGGCG GTGTTCTGGT TTGAGGTGCC GTTTCGCGGC
ACGCTGTCGG CGCTATTCTT CACCACCGGC CTGTTTCTCA CGGTGGTGCT GTGCATCGGC
TACTACGTCT CGGTGTCGAT CCGCAGCCAG GTCGGAGCCA GTCAGGTCGC GTTGTTGCTC
ACCATGCTGC CCACGACACT GCTGTCGGGC TTCTCTTTCC CCATCGACCA GATGCCGACC
GCAGTCCAGG CCGTCACATA CATCGTGAGC GGCCGCTACT ACGTGACGAT CCTGAAGGCG
CTTTTTCTCA AGGGCGCGCC CTGGGGCGAA CTGGCACTGC CGATTTTCTG TCTGGCGCTG
TATGCGGCGG CGATGGTGCT GCTGGCGGCC CGCGCTTTCC GAAAAACCCT GGATTGA
 
Protein sequence
MKWRRVKAIV VKESLQIVRD PRSLMIALLI PLLQMFLLGY GISLDIKQIP LCAYDNEGSQ 
TSQDLLRRFS ASPYFSLQGQ ATSYAEVGRS LDDGRCSIAI VIPSGFSKRL NDTGQGLVQA
LLDATDTNNA SLAAGYASAV IASYSAAVQL QTIEQRGASV QTLTPVEVRA RVWFNEDMVS
RNFIIPGVVA LVMAIIGSQL SSLTIAREWE RGTMELLVST PIQPLELMLG KLLPYFVVGM
VDACICLALA VFWFEVPFRG TLSALFFTTG LFLTVVLCIG YYVSVSIRSQ VGASQVALLL
TMLPTTLLSG FSFPIDQMPT AVQAVTYIVS GRYYVTILKA LFLKGAPWGE LALPIFCLAL
YAAAMVLLAA RAFRKTLD