Gene Rfer_0852 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRfer_0852 
Symbol 
ID3964075 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodoferax ferrireducens T118 
KingdomBacteria 
Replicon accessionNC_007908 
Strand
Start bp888653 
End bp889444 
Gene Length792 bp 
Protein Length263 aa 
Translation table11 
GC content60% 
IMG OID637915680 
Productmethionine aminopeptidase, type I 
Protein accessionYP_522131 
Protein GI89899660 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0024] Methionine aminopeptidase 
TIGRFAM ID[TIGR00500] methionine aminopeptidase, type I 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGATCACG GCATTCCCAT CCATTTCGCC GAGGGTATCG ACATGGCGCG GCGAGCCGGT 
CGGCTTGCCG CAGAAGTTCT CAGCATGGTC GAGGCATACG TCGTGCCGGG GGTGAGTACC
GAGGCGCTCG ACCGAATCTG CCGCGACCAC ATCGTGAATG TCCAGGGCGC CATTCCAGCC
AACTTGGGGT ACCACGACTA TCCCAAGACC ATCCTCACCT CAGTCAACCA GGTGGTTTGC
CATGGCATCC CCTCGCCCGA TAAGATTTTG AAGAAGGGCG ACATCATCAA CATCGATGTT
GCCGTCATCA AGGATGGCTG GTTCGGCGAC ACCAGTCGCA TGTACTTCGT CGGAGCCCCC
AGCGTGTTGG CTCGGCGCCT GGTGGAGACG ACGTACGAAG CATTGCTGGC CGGAATCCGG
CAAGTCAAGC CTGGAGCGAC TCTTGGCGAT ATTGGCCATG CCATCCAGTC GGTCGCTCAC
CGGGAGCATT TCAGCGTAGT GCGCGAATAC TGCGGGCACG GCATTGGTCA GGTCTACCAC
GATGAGCCGC AAGTGCTGCA CTATGGGCGG CGCGGGGAAG GGATCAAGCT CGAACCGGGG
ATGGTTTTCA CCATCGAACC GATGCTCAAC GCAGGCAAAC GCGAAACCAG GCAATTGCCC
GACGGGTGGA CAGTCGTGAC AAAGGACAGG TCTTTGTCTG CCCAGTTTGA ACACATGGTG
GCTGTGACGC CTTCAGGGTA TGAGGTGCTT ACGCCTTGGC CTGGAGGCAC AGGTGCTGAC
GCGCCGGTTT GA
 
Protein sequence
MDHGIPIHFA EGIDMARRAG RLAAEVLSMV EAYVVPGVST EALDRICRDH IVNVQGAIPA 
NLGYHDYPKT ILTSVNQVVC HGIPSPDKIL KKGDIINIDV AVIKDGWFGD TSRMYFVGAP
SVLARRLVET TYEALLAGIR QVKPGATLGD IGHAIQSVAH REHFSVVREY CGHGIGQVYH
DEPQVLHYGR RGEGIKLEPG MVFTIEPMLN AGKRETRQLP DGWTVVTKDR SLSAQFEHMV
AVTPSGYEVL TPWPGGTGAD APV