Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rfer_0846 |
Symbol | |
ID | 3964069 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodoferax ferrireducens T118 |
Kingdom | Bacteria |
Replicon accession | NC_007908 |
Strand | + |
Start bp | 884519 |
End bp | 885232 |
Gene Length | 714 bp |
Protein Length | 237 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 637915675 |
Product | LysR family transcriptional regulator |
Protein accession | YP_522126 |
Protein GI | 89899655 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCTACGC CCACTTCTGC TCCTTCCGAG ATGGCATTTT TTAGCTTGCT GGTGCGTTTC GGAAGTTTTT CGAATGCTGC GCGCGAGCTT GATATCACCA CCCGGGCGGC CAGCAAGCGA CTGGCCCAGA TGGAGGCGCG GCTGGGTGTG CAGTTGCTCA ATCGCACGAC GCGGCGCATG GGCCTCACAC CCGAAGTTGA GGTGTACTTG GAACACGCGC GCCGCATCCT CGCCGATATT GGTGACATGG AGCGGTTGGT GTCAAACTCA GTTGGCGCGC CCAAAGGCCT GCTGCGCGTG AACGCCACTT TGGGTTTTGG ACGCAGCCAC ATCGCTTCAT TGATTTCAGA CTTTGCAAAA CTCTATCCGG AAGTGCAGGT CCAACTGCAG CTCACGGTCA ATCCACCACC ACTGACTGAA GACGCATTCG ATATCTGCAT TCGCCAGGGT GACGAGGCCT ACGGCATTTG GCACCTGAGC TCAGGCCAGC GCACCGAGAC TGTCAAGGTG CGCGGAACCT TAAGCACCAA CGACGGCGAG ACCGCGCTGA ATTGGGCGCT TGATGGTCAC GGCGTCGTGA TGCGTGCGGA ATGGGATATC GCCAAATACC TGGACAGTGG ACGCTTGCGC CAAGTGCTAA CGAACTGGCA GACACCGCCT GCTGATATTC ACGCGGTTTA CCCACAACGG CTCACCCGCG GGCCACCGAA CTGA
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Protein sequence | MSTPTSAPSE MAFFSLLVRF GSFSNAAREL DITTRAASKR LAQMEARLGV QLLNRTTRRM GLTPEVEVYL EHARRILADI GDMERLVSNS VGAPKGLLRV NATLGFGRSH IASLISDFAK LYPEVQVQLQ LTVNPPPLTE DAFDICIRQG DEAYGIWHLS SGQRTETVKV RGTLSTNDGE TALNWALDGH GVVMRAEWDI AKYLDSGRLR QVLTNWQTPP ADIHAVYPQR LTRGPPN
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