Gene Rfer_0836 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRfer_0836 
Symbol 
ID3964059 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodoferax ferrireducens T118 
KingdomBacteria 
Replicon accessionNC_007908 
Strand
Start bp874703 
End bp875557 
Gene Length855 bp 
Protein Length284 aa 
Translation table11 
GC content63% 
IMG OID637915666 
Product6-phosphogluconate dehydrogenase, NAD-binding 
Protein accessionYP_522117 
Protein GI89899646 
COG category[I] Lipid transport and metabolism 
COG ID[COG2084] 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCAACCA TCGCTTTTCT CGGCACCGGC CTGCTCGGCG GCGCCTTCGC TGAAGCTGCC 
GCCAAGCGCG GCGACACGGT CACCGCGTGG AACCGTTCAC CCGACAAAGT TCATGCGCTG
GCGCAGTTTG GCGTGATGGC CGCAGCGAAC CCGGCCGAGG CGGTGCAGAG CGCGGCGCGC
GTTCACCTCG TGCTCAAGGA TGACGCCGTG GTTGAAGAGG TGCTGGCGGC CGCGCGCGCC
GGGCTTTCAC CCGATGCGAT CATCATTGAC CACACCACCA CATTGCCGAC ACTCACTGCG
GCGCGTGCCG AACGGCTCCA TGCCGAAGGA GTCAAGTACC TGCACTGCCC TGTCTTCATG
GGGCCGCCCG CGGCGCGCAA TGCGCAGGGC ACGATGATGG TCGCCGGGCC CAAGGCGCTG
TTCGAAAGCG TCAAAGCTGA TCTGGCCAAA ATGACGGGTC GGCTGGTATA CATGGGTGAG
CGCACGGATG TGGCCGCCGT GAACAAACTG TTCGGCAATG CCATGATCAT CGGCGTGGCG
GCGGTGATGG CGGACATACT GACGATGGCA CAGGCGAGCG ATGTCAGTGC AGAGGACGCC
ATCAAGCTGT TGGGTTTTAT CGATGTGAAT GCCATCGTGG CCGGGCGTGG CGTGAACATG
GCAAAAGGAA ACTTCAGCCC GAGTTTTGAA TTGACGATGG CGCGCAAAGA TGTGAGGCTC
ATGTTGGAGA CTGCGGGCGA TCGACCCATG GCGGTGCTGC CGTCGGTGGC GACCCGTATG
GATCAGCTGA TTGCGGCCGG ACACGGCGCT GACGACTGTT GTGTGCTTGG CCTTGACGCG
GTGCAACGGC CGTAG
 
Protein sequence
MSTIAFLGTG LLGGAFAEAA AKRGDTVTAW NRSPDKVHAL AQFGVMAAAN PAEAVQSAAR 
VHLVLKDDAV VEEVLAAARA GLSPDAIIID HTTTLPTLTA ARAERLHAEG VKYLHCPVFM
GPPAARNAQG TMMVAGPKAL FESVKADLAK MTGRLVYMGE RTDVAAVNKL FGNAMIIGVA
AVMADILTMA QASDVSAEDA IKLLGFIDVN AIVAGRGVNM AKGNFSPSFE LTMARKDVRL
MLETAGDRPM AVLPSVATRM DQLIAAGHGA DDCCVLGLDA VQRP