| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_0833 |
|---|
| Symbol | |
|---|
| ID | 3964192 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodoferax ferrireducens T118 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007908 |
|---|
| Strand | - |
|---|
| Start bp | 872844 |
|---|
| End bp | 873353 |
|---|
| Gene Length | 510 bp |
|---|
| Protein Length | 169 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 637915663 |
|---|
| Product | heat shock protein Hsp20 |
|---|
| Protein accession | YP_522114 |
|---|
| Protein GI | 89899643 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0071] Molecular chaperone (small heat shock protein) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACCATGC TGAACTCCCT TAAAAAAACC GGTGAAAAAA TTGGGCACGA GATCAGTCGC
GCTTGGGATA GCCTGTCCGA AGGCTGGCGC GAGTTACTCA GCCGCAGCAG CGACTCTCTC
ACCAAATTCA CGCATCACAA AGAAGAAACG CCAACCGCAG GCAGCGCGCT TGCGGCGTTT
CCAAGCTGGA GTCTGCTGGC TGGCGAACTG GAAGAAACGG CGAAGGATGT GCTGGTGCGG
ATCGAGTTGC CCGGCATGGA CAAGGACGAT TGCCAGATCA CCATTGACGG CAACACGCTT
TATCTGAGCG GCGAGAAACG CTTTGAACGC GAAACCAGTG ACAGCACCTA CCACGTCATG
GAGCGCGCCT ACGGTTCATT CCAGCGCGCC ATACCCTTGC CGCGCAACGT GAACATCGAG
AAGGCCCAAG CCAGCTTCAA GAATGGCGTG TTGACGGTTC GATTGCCCAA GGAAGGCAAA
GACCAGGCCA AGTCACTGCC GGTGTCGTGA
|
|---|
| Protein sequence | MTMLNSLKKT GEKIGHEISR AWDSLSEGWR ELLSRSSDSL TKFTHHKEET PTAGSALAAF
PSWSLLAGEL EETAKDVLVR IELPGMDKDD CQITIDGNTL YLSGEKRFER ETSDSTYHVM
ERAYGSFQRA IPLPRNVNIE KAQASFKNGV LTVRLPKEGK DQAKSLPVS
|
|---|
| |