| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_0831 |
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| Symbol | |
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| ID | 3964190 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodoferax ferrireducens T118 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007908 |
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| Strand | - |
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| Start bp | 868425 |
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| End bp | 870860 |
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| Gene Length | 2436 bp |
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| Protein Length | 811 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637915661 |
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| Product | ATP-dependent protease, putative |
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| Protein accession | YP_522112 |
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| Protein GI | 89899641 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG1067] Predicted ATP-dependent protease |
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| TIGRFAM ID | [TIGR00764] lon-related putative ATP-dependent protease |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.726223 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATAAAGC CCACGGAACT TCTGCCCCCA CTTGCGCTTG AAACCCGCCA GTTGCATCAC
GCGTGTGATC CGGCGCAATT TGGGTTCCAA ACCACCGCGG AACTGGAGGC CTTAAGCGAA
TTGATTGGCC AGACCCGCGC CACAGAGGCC GTGCGCTTCG GCGCGGGCAT CCGGCGTGAG
GGCTACAACA TCTTTGTCCT GGGGCCCGCT GGCGTGGGCA AACGCAGCAT GGTGGGCCAG
TTTCTGGCCA AAAAGGCAGA GGCCGAGCCC AAGTCGTCCG ACTGGTGCTA CCTCAACAAC
TTCGCGCAGC CGCACAAGCC CCGGGCCATC CGGCTGCCAT CGGGCAAGGG CCTGGAATTG
CAGCAGCAGA TGGCGCAATT GGTTGACTAC TTGCGCTCGG CCATTCCTGC CTTGTTTGAG
AGTGAGGAAT ACCGGGCCAA GGCGGGGGCC ATCCAGGATG AATTCACCAA ACGGCAAGAG
AGTGCTTTCA AGGAACTGGG TGAGGACGCT GTCAAGCAGC AGATCGTGCT GCTGCGCACG
CCTGGCGGGT TTGCGTTTGC CCCCACCCAA AACCAGGAAG TGATCACGCC CGACGAGTAC
GAAAAACTGC CACAGGAAGA AAAAGACCGG ATCAGGCAAG TGATCGCCGA GCTGCAGGAA
CGACTTGAAA AAATATTGAG CCACGTGCCC CAGTGGATGA AAGAGCGCGG CGAACAGATC
AAGCAGCTTA ACCGCCAGAC CACGCGCGCC GTCGTCACGC ATGTGATGGA CGAACAGCGC
ACCCGATTCT CCGATCTGCC TGAAATCCGG ACCTACCTCG ACCTCGTGCA GCAGGACATG
ATTGAGAACG CCGACGACTT TCGCAATGAG GAGGAATCGG CCAATCTCTC TGGCTTGATG
GTGGTCACCC GCAAAACCTT TCATCGCTAC CAGGTGAATG TGCTGGTCAG CAACGGTGAG
CACGGCGGCG CCCCGATCGT GAGCGAGGAC AACCCGACCT ACAGCAACTT GATCGGTCGG
GTCGAGCACA TTGCCCAACT GGGCGCGCTG GTGACCGACT TCACCCTGAT CAAACCGGGT
GCGCTGCACC GCGCCAATGG CGGCTACCTG CTGCTCGACG TGCGCAAAGT GCTGCTGCAA
CCGTTTGCGT GGGACGCCCT GAAGCGCGCC CTGCAGGCGC GCGAGATCCG CATCGAATCG
CTCGGGCAGA TGTACAGCCT GGTGAGCACC GTCTCGCTGG AGCCGGAGCC GATGCCGCTG
GATGTCAAGA TTGTGCTGTT TGGCGATCGC CTGTTTTATT ACCTGCTGCA GCAATACGAC
CCCGACTTTT CTGAACTGTT CAAGGTGGCG GCCGACTTCG AGGACCGCAT CGAGCGCAGT
GCCGAGACCC ATCTGCTCTA TGCCCGTTTG ATCGCCACGC TCTGCGCGAA AGAAAAATTG
TTACCACTCG ACAGCGGCGC CGTCGCGCGG GTGATTGAGC ACAGTGCGCG ACTGGTCGGC
GATGCGCAGC GCCTGTCTAC CCATATGCGA AGCATTGCGG ATTTGCTGCA GGAGGCCGAT
TTCTGGGCGC GCGAGGCGGG TCTGGCGGTG GCAACGGCAA GCAACGTGCA GCAAGCCATT
GACGCTCAAA TTCGTCGGCA AGACCGGCTG CGCACCCAGT TGCAGGACGC GATTCTGCGC
GACACCTTAT TGATCGACAC GCAAGGGGCA GTAGTGGGCC AGATCAACGG CCTGTCGGTG
CTCGAACTGG GGGACTTTGC CTTTGCCCAG CCGACCCGCA TTACCGCCAC CACTCGCCTG
GGTCAGGGGG AAATGATCAA CATTGAGCGC GAAGTCAAGC TCTCCGGCGC CATCCACTCC
AAGGGGGTGC TGATTCTTTC CTCATTTCTG GCCGCCCGCT ACGCGCGCAA CCAGCCTTTG
TCTTTGACTG CCAGCCTGGT GTTTGAGCAG TCCTATGGCC AGGTCGAGGG CGACAGCGCA
TCCTTGGCCG AACTGTGTGT GCTGCTGTCC AACCTGGCCA ACGCGGCGGT GCGGCAATCC
CTGGCGGTGA CGGGTTCGGT CAATCAGTTA GGCCAGGTGC AGGCGATTGG GGCCGTCAAC
GAAAAAATCG AGGGTTTTTT TGACATTTGC GCGGCGCGCG GATTGACCGG TGAGCAGGGG
GTGTTGATAC CCGGCACCAA CGTCAAGCAC TTGATGCTGC GCCGCGATGT GGTCGCGGCA
GCAGAGAATG GGCAGTTCCA CATCTACGCG GTTGACCATG TGGATCAGGC GATGACGATT
CTTACCGGCG TGCCGGCGGG AGAGGCGGGG GCAGACGGTC AATACCCGAT GGAGAGCATC
AATCGCCGGG TCGCGGCGCG GGTGGCTGGA CTCAGCGCCT TGCGCAAAGC GTTTGCCCAC
CCGTCGGAAG AGAAAAAAAT GGACCGGAGC CATTGA
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| Protein sequence | MIKPTELLPP LALETRQLHH ACDPAQFGFQ TTAELEALSE LIGQTRATEA VRFGAGIRRE
GYNIFVLGPA GVGKRSMVGQ FLAKKAEAEP KSSDWCYLNN FAQPHKPRAI RLPSGKGLEL
QQQMAQLVDY LRSAIPALFE SEEYRAKAGA IQDEFTKRQE SAFKELGEDA VKQQIVLLRT
PGGFAFAPTQ NQEVITPDEY EKLPQEEKDR IRQVIAELQE RLEKILSHVP QWMKERGEQI
KQLNRQTTRA VVTHVMDEQR TRFSDLPEIR TYLDLVQQDM IENADDFRNE EESANLSGLM
VVTRKTFHRY QVNVLVSNGE HGGAPIVSED NPTYSNLIGR VEHIAQLGAL VTDFTLIKPG
ALHRANGGYL LLDVRKVLLQ PFAWDALKRA LQAREIRIES LGQMYSLVST VSLEPEPMPL
DVKIVLFGDR LFYYLLQQYD PDFSELFKVA ADFEDRIERS AETHLLYARL IATLCAKEKL
LPLDSGAVAR VIEHSARLVG DAQRLSTHMR SIADLLQEAD FWAREAGLAV ATASNVQQAI
DAQIRRQDRL RTQLQDAILR DTLLIDTQGA VVGQINGLSV LELGDFAFAQ PTRITATTRL
GQGEMINIER EVKLSGAIHS KGVLILSSFL AARYARNQPL SLTASLVFEQ SYGQVEGDSA
SLAELCVLLS NLANAAVRQS LAVTGSVNQL GQVQAIGAVN EKIEGFFDIC AARGLTGEQG
VLIPGTNVKH LMLRRDVVAA AENGQFHIYA VDHVDQAMTI LTGVPAGEAG ADGQYPMESI
NRRVAARVAG LSALRKAFAH PSEEKKMDRS H
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