Gene Rfer_0817 details

Gene Information

• Locus tag: Rfer_0817
• ID: 3964176
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Rhodoferax ferrireducens T118
• Kingdom: Bacteria
• Replicon accession: NC_007908
• Strand: +
• Start bp: 852002
• End bp: 852712
• Gene Length: 711 bp
• Protein Length: 236 aa
• Translation table: 11
• GC content: 63%
• IMG OID: 637915647
• Product: YhhN-like
• Protein accession: YP_522098
• Protein GI: 89899627
• COG category: [S] Function unknown
• COG ID: [COG3714] Predicted membrane protein

Plasmid Coverage information

• Num covering plasmid clones: 28
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAGCCTGC GTTCTCCAAC ACCCATCACC GAGCGCAACG GTCGACTTGA GCTGTTGCTG 
ATCGCGCTTG CGGTCCTGTC CACCGCGACA CGCGTGCTGG ACCTGACAAC GCTGCACTTT 
GTCTTCAAAC CGCTGACGAT GCTGGTAGCT ATTGCTTTGG TAGCGGCTCG TTCTTATTCG 
ACGGGGGCTG TAGCCAGATT TGATTCATAT TTGTTGGCCG CGCTAGCAGC CTCGCTGGCG 
GGCGATGTGT TTCTGATGTT GCCCGGCAAC TACTTCATCC CGGGCCTGGC CTCCTTTCTG 
GTGGCTCATC TTTTCTACAT CGCCTTGTTC CGTCAGGGTG TGCCCTGGTT TCCCAGCCGC 
CGCGCCTTGG CTGGCACGCT GGGTATCGGT GCCGCCATGT ACGCCTGGGT CTGGGGCGGG 
CTGGCCGACC CGGTCTTGAG AGTCGCCGTG GCGGCCTACG TCAGCGTGAT TGCACTGATG 
GTGGCGCAGG CCATCGGTCG TGCGGCGACG GTGCGTGATA CAGCCGCCAA GGCCGTGGGC 
CTGGGCGCCT GCGTCTTCAT GCTCAGCGAC GCGCTGATCG CCGTCAACCG CTTTGTGCAG 
CCGCTGCCGC TGGTGTCTTT ATGGGTGCTG GCGAGCTACT ACACGGCGCA GATTCTGATC 
GTGCACAACG CCCGGCCGGT TGCCCCGGCG GCTCCCGCTA CACTTGCCTG A 

 

Protein sequence

MSLRSPTPIT ERNGRLELLL IALAVLSTAT RVLDLTTLHF VFKPLTMLVA IALVAARSYS 
TGAVARFDSY LLAALAASLA GDVFLMLPGN YFIPGLASFL VAHLFYIALF RQGVPWFPSR 
RALAGTLGIG AAMYAWVWGG LADPVLRVAV AAYVSVIALM VAQAIGRAAT VRDTAAKAVG 
LGACVFMLSD ALIAVNRFVQ PLPLVSLWVL ASYYTAQILI VHNARPVAPA APATLA