| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_0813 |
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| Symbol | |
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| ID | 3963977 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodoferax ferrireducens T118 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007908 |
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| Strand | + |
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| Start bp | 848974 |
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| End bp | 849768 |
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| Gene Length | 795 bp |
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| Protein Length | 264 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637915643 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_522094 |
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| Protein GI | 89899623 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCTGCCC CCCCCTCAAC CCGCACGGTC CTGGTCACCG GCGCTGCCAA ACGCCTGGGG
CGTGAAATCG CGCTCGCGCT GGCCAAAGAC GGCTGGCAGG TGGCGGTGCA TTATCGGGAC
TCGCTTGAAG ATGCTAGAAA AACAGTAGCT GACTGCGCAG ATTTGGCGGG GGCTAGCGCC
TTATTCCGTG CAAATTTGAC GAACGAGGCA GCGGTGCGTC ATTTGCTGCC GCAGGTGATT
GCCCAGTTCG GCCGGGTTGA CGCCATCGTC AACAGCGCCT CCACCTTCGA GCATGACAGC
GCCGCCAGTT TCAGCTTTGC GGCGATGGAC AAGCACATGC GCAGCAATGC CGGGGCCGCC
ATTATTCTGA GTGAAGCGCT GCACGCCCAC GTGGTGGGGC GCGACGGCCC GGCCAGCGCG
CAGGCCCGCC GCCCGCTGGG TGTGGTGGTC AACCTGCTGG ACCAGAAGTT GTGGAACCAG
AACCCGGATT TTTTCAGCTA CACACTGTCC AAAGCCGCAC TGGAGGCGGC CAACACCATG
CTGGCGCTGG CGCTGGCGCC ACACCTGCGT GTGGTCGGCG TGGCGCCGGG CCTGACGCTG
ACCAGCCACT TGCTGAACCA CGACAAGTTT GAAGCGCTGC ACCAGCTCTC GCCGCTGGGC
CGCTCGTCGA CGGCGGCGGA TGTGGCGGCA ACCGTCAAAT TTGCCATCGA CAACCAGTCC
ATCACCGGCA CCACGCTGCT GGTGGATGGC GGCCAGCACC TGATGAAATT CGAACGCGAT
TTTTCCATGC TGTGA
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| Protein sequence | MSAPPSTRTV LVTGAAKRLG REIALALAKD GWQVAVHYRD SLEDARKTVA DCADLAGASA
LFRANLTNEA AVRHLLPQVI AQFGRVDAIV NSASTFEHDS AASFSFAAMD KHMRSNAGAA
IILSEALHAH VVGRDGPASA QARRPLGVVV NLLDQKLWNQ NPDFFSYTLS KAALEAANTM
LALALAPHLR VVGVAPGLTL TSHLLNHDKF EALHQLSPLG RSSTAADVAA TVKFAIDNQS
ITGTTLLVDG GQHLMKFERD FSML
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