| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_0806 |
|---|
| Symbol | |
|---|
| ID | 3963970 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodoferax ferrireducens T118 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007908 |
|---|
| Strand | + |
|---|
| Start bp | 843620 |
|---|
| End bp | 844558 |
|---|
| Gene Length | 939 bp |
|---|
| Protein Length | 312 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 637915636 |
|---|
| Product | LysR family transcriptional regulator |
|---|
| Protein accession | YP_522087 |
|---|
| Protein GI | 89899616 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG0583] Transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGATATCA TTGATCCCAT GATGGAACAA TCTGACGCGG GCATCGACCC CAATGACCTG
CTCATTTTTG CCAACGTGGC CGAGCTGGGC AGCTTTAGCC GCGCAGCGGA ACGCATGGGT
TTGCCCAAAT CCACCGTGTC GCGCCGGCTG GCCGCACTGG AGCAGCGCCT GGGCGAGCGC
CTGCTGCTGC GCACCACCCG GCGTCAGTCT TTGACCGAGT TCGGCTTGCA ACTGCTGGAG
CATGCGCGTC AGGTGGTGTC TGAAGTGGAG GCTGTGACGG CGCTCAGTGA ACGTCGCCAG
GCCACGCCGA GCGGGCGCTT GCGGGTTTCC ATGCCCAGTG ACTTTGCCAA CCTGCTGTTG
GCCGATACGC TGGCGGCCTT CATTGCGCTG TATCCGGCGA TCCAGCTGGA GCTCGATTTG
TCACCGCGTC GGGTTGACCT GCTGGGTGAA GGCTTTGATG TCGCCCTGCG CATGGGCAAC
CTGCCCGACG ATGCCTCGCT GGCAGCGCGG CGCCTGGCCG TATTTTCTTT CGGTTTGTAC
GCTGCCCCCA GCTATCTGGC CGAGCACGGG GAGCCCGCTG ACCCGGATGA TCTGGTCCGG
CATGCGGCCA TCAGGATGCT GCAAGCCAAT GGGGAGGCGG CCTCCTGGAC CTTGGCACAG
GGAGAGCAGC GCTGGCAGGG TGTGCCGCCG GGCAGGGCCA GCGCCAATGC GCCTGAGCTG
CTGATCAAGC TGGCCTGTGC CGGCGCGGGG ATTGCGGCGG TGCCAGACTA CTTTGCCGCA
CCTGACGTTC GCCGGGGCGC GCTGCGGCGG GTGTTGCCTG GCTGGTGCCT GCCCAGCCAC
CCGGCGTGGG CGGTGTTTCC GGAGCGCAAG CTGATGCCAG TGAAGACACG GGTCTTCATC
GATATGCTGC AAACTGCGTT GGCACAAGTG CAGCCTTGA
|
|---|
| Protein sequence | MDIIDPMMEQ SDAGIDPNDL LIFANVAELG SFSRAAERMG LPKSTVSRRL AALEQRLGER
LLLRTTRRQS LTEFGLQLLE HARQVVSEVE AVTALSERRQ ATPSGRLRVS MPSDFANLLL
ADTLAAFIAL YPAIQLELDL SPRRVDLLGE GFDVALRMGN LPDDASLAAR RLAVFSFGLY
AAPSYLAEHG EPADPDDLVR HAAIRMLQAN GEAASWTLAQ GEQRWQGVPP GRASANAPEL
LIKLACAGAG IAAVPDYFAA PDVRRGALRR VLPGWCLPSH PAWAVFPERK LMPVKTRVFI
DMLQTALAQV QP
|
|---|
| |