| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_0801 |
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| Symbol | |
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| ID | 3963965 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodoferax ferrireducens T118 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007908 |
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| Strand | + |
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| Start bp | 838009 |
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| End bp | 838947 |
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| Gene Length | 939 bp |
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| Protein Length | 312 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637915631 |
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| Product | type II secretion system protein |
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| Protein accession | YP_522082 |
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| Protein GI | 89899611 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG2064] Flp pilus assembly protein TadC |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACACCGA TCCAGCTCGC TTTTCTCGCG CTCATCTTCG TCGTCGTCGT CGCCGGCGTT
CTTGGCGTCT CCGGCGTGAT GCGCCCGAAT GTCGCACGCC AGCGTCTGGC CGGGCTGGTG
GCCGACGCCC CGCCGCGACC GCCGATCCAG CACCGCTGGC TGCACTGGAT CGCCGATGCG
ACGCGCCCCA TCAGCAAGCT TTCGATGCCC GAGGAGGGCT TTGAGAAGTC GAGCCTCAAG
CTGCGCTTTG CCCACGCCGG CATTCGCAAC GCCAACGCCG CATCGGCGTT CTTCGGCATC
AAGACGCTGT TGACCCTGGG TTTGCCCTTG GTCGCGTTCG CGCTGCTCAC GTTGTCAGGC
TCGCCACTGA AAGGCAACAC CTTGCTGCTC GTCATGCTGG CGCTGGCCGC GTTGGGCTAC
TACGGCCCCA ACCTGGTTTT GTCCCACTTG GTCATGGTCA GGCAGCGAGA AATATTCGAG
TCTTTTCCCG ATGCCCTTGA TTTGATGACG GTCTGCGTGG AGGCCGGTTT GGGCACTGAG
GCCGCGATGA TGCGCGTGGC CGATGACCTG CAATTCAAGA GTCCGGCACT TGCAGACGAG
ATGCGTCTGG TCAACCTTGA GTTGCGTGCC GGCGCTGTGC GCGAGCGGGC CTTGCGCAAC
CTGGCCATAC GCACCGGTGT CGAGGAGGTG GACGGCTTCG TCACCATGAT CAGCCAGGCA
GAGCGGTTCG GTACCAGCAT CGCCGCTTCA CTGCGCATCC ATGCCGAGTT GCTGCGCACG
CGCAGGCGCC AGCGCGCCGA GGAGGCCGCC GCCAAGATCG CGCTCAAGCT GCTCTTCCCG
CTGATCTTCT GCATCTTCCC TTCGTTGATG GTGGTCCTGA TGGGCCCCGC CATGATTCAG
ATTTATCGCG TTCTGTTGCC CACGATGGGC GGACACTGA
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| Protein sequence | MTPIQLAFLA LIFVVVVAGV LGVSGVMRPN VARQRLAGLV ADAPPRPPIQ HRWLHWIADA
TRPISKLSMP EEGFEKSSLK LRFAHAGIRN ANAASAFFGI KTLLTLGLPL VAFALLTLSG
SPLKGNTLLL VMLALAALGY YGPNLVLSHL VMVRQREIFE SFPDALDLMT VCVEAGLGTE
AAMMRVADDL QFKSPALADE MRLVNLELRA GAVRERALRN LAIRTGVEEV DGFVTMISQA
ERFGTSIAAS LRIHAELLRT RRRQRAEEAA AKIALKLLFP LIFCIFPSLM VVLMGPAMIQ
IYRVLLPTMG GH
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