| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_0800 |
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| Symbol | |
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| ID | 3963964 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodoferax ferrireducens T118 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007908 |
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| Strand | + |
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| Start bp | 837027 |
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| End bp | 837995 |
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| Gene Length | 969 bp |
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| Protein Length | 322 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637915630 |
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| Product | type II secretion system protein |
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| Protein accession | YP_522081 |
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| Protein GI | 89899610 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4965] Flp pilus assembly protein TadB |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGACCTGT CTTTTGTACT CTTCGCGGTT GTGGCTTTTC TGGCTGTGGT GCTGGCGCTC
GAAGGTGTGT ACAACGTCTG GGCCTCGCGC AGCAGCCCTG AGGCCAAGCG TATAGCGACA
CGGATCGAGG CGCTGGCCGG CGAGGCATCG GCGCCGGCGA GCATCGAGCG CACCCGTCAG
CGCTCGCGCA TGCCGCGTCT GAACGGCTTG TTGGGCGGCT TGCCCGCGGG CCGGCGCATG
CAGCACTTCG TCACGGCCTC GGCGATGGCG GTCTCGGCGG CCGAGCTGAT CGTGATGTCG
GTCGCACTGG GTGCATTCGG ATTGTTCCTG CCGGGGCTGC TCGGTAAACC GCTGATCTTC
GGTGCGGTGC TGGGGTTGGG CTTGGCCGTG CTGCCCTGGT GGCGCGTTGC CAACCGGCGC
CGCGTCAGGA TTGAGCGCAT AGAGCGCCAG TTCCCCGAGG CGCTGGATTT GATGAGCCGT
GCGATGCGGG CGGGCCATTC ATTCCCTTCC GCGGTCAAGA TGGTGGCGGA CGAGATGACG
GATCCCCTGG GGCACGATTT CCGTGTCCTG TTCGACGAGA TGAACTATGG CGTACCCACC
AATGATGCAC TGGCGAATCT GGCCGAGCGC GTGCCGGTGC CCGATGTGAG CTACTTCGTG
GTCGCCGTGA TGATCCAGCG CGAGTCGGGC GGCAACCTCG CGGAGTTGCT TGACAAGATT
TCCCTGATCG TGCGCGAGCG CCTGAAACTG CTCGGCGAAG TTCGAACCCT GTCCGCCGAA
GGCAAGCTGT CGGCCATCAT CCTCACCGCC TTGCCCTTCG GCGTGGGGCT GGTCGTGAAC
CTCGTCAATC CGAAGTTCAT GGCCGTGCTC TGGACCGACC CCGCGGGCTT GCGTATGGTC
GGTTTGGCGC TTTTCATGAT GCTGCTGGGC ATTCTGTGGA TGCGCAGCAT CATCCGCATC
CGGGTATGA
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| Protein sequence | MDLSFVLFAV VAFLAVVLAL EGVYNVWASR SSPEAKRIAT RIEALAGEAS APASIERTRQ
RSRMPRLNGL LGGLPAGRRM QHFVTASAMA VSAAELIVMS VALGAFGLFL PGLLGKPLIF
GAVLGLGLAV LPWWRVANRR RVRIERIERQ FPEALDLMSR AMRAGHSFPS AVKMVADEMT
DPLGHDFRVL FDEMNYGVPT NDALANLAER VPVPDVSYFV VAVMIQRESG GNLAELLDKI
SLIVRERLKL LGEVRTLSAE GKLSAIILTA LPFGVGLVVN LVNPKFMAVL WTDPAGLRMV
GLALFMMLLG ILWMRSIIRI RV
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