| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_0799 |
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| Symbol | |
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| ID | 3963963 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodoferax ferrireducens T118 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007908 |
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| Strand | + |
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| Start bp | 835658 |
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| End bp | 837016 |
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| Gene Length | 1359 bp |
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| Protein Length | 452 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637915629 |
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| Product | type II secretion system protein E |
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| Protein accession | YP_522080 |
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| Protein GI | 89899609 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4962] Flp pilus assembly protein, ATPase CpaF |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTTTGC GCGAAAGACT AGGGGCTTCG GCCCAAGGGT TCCCGCCAGC GGGCGACCCG
GTGCCCGAAG ATGCGGGGGC GCCGACCCGC GCGTACCAGG ATACCAAGGC GCGCATTCAT
CAGGTGCTGC TCGGCCGCCT GGACCTCGAG GCGATGGAAA ACCTGTCGCC CGAGAACCTG
AAGGAAGAGC TGCGCCAGAT GGTTGAGCGC CTGCTGCTTG AAGAGAACCT GGTTCTCAAC
GCCAGCGAAC GTCGCAATCT GGTGCGCGAC ATCCAGTACG AGATGCTCGG CTTCGGCCCG
CTCGAACCCT TGCTGGCAGA CCCCACGGTG TCGGACATCC TGGTCAATAC CTACCACCAG
GTCTATGTCG AGCGCCGCGG ACGGCTTGAG CTGACGGACA TCAAATTCAC CGACGACGAT
CACCTGATGA AGATCATTGA CAAGATCGTC TCAAGAGTCG GGCGTCGCAT CGACGAATCC
AGCCCGATGG TGGACGCCCG CCTGCCCGAC GGTTCGCGCG TCAACGCGAT CATTCCGCCG
CTGGCAATTG ACGGCCCGAT CCTGTCGATA CGGCGCTTTG CGACCGTGCC GCTGAAGCTC
TCCAACCTGA TCGAGTACCG GTCATTGTCA GACGAGATGG CGCAGTTCAT CGGCGCCTTG
TCGCAGGCCA AGATCAATAT TCTCATTTCA GGCGGAACGG GATCTGGCAA GACCACTCTG
CTCAACATCC TGAGTGCCTT CATCAGCACG ACCGAGCGCA TCGTGACCAT CGAAGACGCG
GCCGAGCTGC AGTTGCAGCA GCCCCACGTT GTGCGTCTGG AGACGCGCCC GCCCAACATC
GAGGGACGCG GCGAGGTGAC GCAGCGCGCG CTGGTGCGCA ACGCGCTGCG CATGCGGCCC
GACCGCATCG TCCTCGGCGA AGTACGCGGC GCCGAGGCGC TCGACATGCT GCAGGCGATG
AACACCGGTC ACGAGGGATC GATGACCACC GTGCATGCCA ACTCGCCGCG CGATGCGCTG
GCGCGGCTGG AAAGCATGAT TGCGATGGCC GGCGTGGACT TGCCCGCCAA GGCAGCGCGT
GCCCAGGTGG CCTCGGCGAT TGGCGTGATC ATCCAGGAGA GCCGCATGAG CGACGGCACG
CGCAAGCTGA CGAGCATCCA GGAGGTCACC GGCATGGAAG GCGAAACCGT GACGCTGCAG
GAAATCTTCA TCTTCAGGCA GACCGGCGTC GGCCCCAATG GCGCGGTGGA GGGCCACTTC
ACCGCAACCG GCGTGCGCCC GCGCTGCTGG GACCGCTTGA TAACACGCGG CATCAATCTG
CCGCAAACCC TGTTCGAGCC GGTGCGGCAC GAAGTCTGA
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| Protein sequence | MSLRERLGAS AQGFPPAGDP VPEDAGAPTR AYQDTKARIH QVLLGRLDLE AMENLSPENL
KEELRQMVER LLLEENLVLN ASERRNLVRD IQYEMLGFGP LEPLLADPTV SDILVNTYHQ
VYVERRGRLE LTDIKFTDDD HLMKIIDKIV SRVGRRIDES SPMVDARLPD GSRVNAIIPP
LAIDGPILSI RRFATVPLKL SNLIEYRSLS DEMAQFIGAL SQAKINILIS GGTGSGKTTL
LNILSAFIST TERIVTIEDA AELQLQQPHV VRLETRPPNI EGRGEVTQRA LVRNALRMRP
DRIVLGEVRG AEALDMLQAM NTGHEGSMTT VHANSPRDAL ARLESMIAMA GVDLPAKAAR
AQVASAIGVI IQESRMSDGT RKLTSIQEVT GMEGETVTLQ EIFIFRQTGV GPNGAVEGHF
TATGVRPRCW DRLITRGINL PQTLFEPVRH EV
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