| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_0798 |
|---|
| Symbol | |
|---|
| ID | 3963962 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodoferax ferrireducens T118 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007908 |
|---|
| Strand | + |
|---|
| Start bp | 834472 |
|---|
| End bp | 835647 |
|---|
| Gene Length | 1176 bp |
|---|
| Protein Length | 391 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 637915628 |
|---|
| Product | response regulator receiver domain-containing protein |
|---|
| Protein accession | YP_522079 |
|---|
| Protein GI | 89899608 |
|---|
| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG4963] Flp pilus assembly protein, ATPase CpaE |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.314887 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAATCA AGCTCATCAC CCCTGACCCG TTCAACGCCG AGGCGTGGAC CGATGTCCTG
CGCGTTGAGC CGGCGTTCGA TGTCACGCCG ATCGTGTGTG CGTTGCGCGA CGTGAAGGTG
ATTTTTAATG GCAGTCGCCC CGACCTCGTG CTGGTCGAGA CCGCTACGCC ACAAGACTTC
GAGGCGCTCG AGGCGCTGGC CAATGCCCAC CCCGAGATTG ACTACGTGCT GGTCGGCAAC
GAGCTCAGCC CCGAGTTTCT GTTGCGCGCC ATGCGCGCCG GCGTGCGCGA GGTGCTGCCT
TCGCCCGCGG CGCCTGAGGC GGTACTGGCG GCGCTGCGAC GCCAGTTGCG CAAACGCGCG
CCGGCTACCG TCTTGCCCGC CACGCACCAC GCCGAGGTGC TCGCCTTGGT GTCGTGCAAG
GGCGGTAGCG GGGCCACCTT CATCGCTGCC AACCTGGCCC ATCTGCTGGC TGCGGGTGGG
CAGCGCCAGG TTGCGCTGAT CGACATGAAC CTGCAGTTTG GCGATGCTGC GCTTTTTGTC
AGCAGCCAAA CGCCCGTGAG CAACGTGGCT GATGTGGCGC GCAACATCAA CCGGCTTGAC
GCCGACCTGT TGCGATCCTC GATGACCGAA GTGGCGCCCG GCCTGTGGGT GCTGGCGGCG
CCGGATGACC CGGCGCAGGC GACTGACGTG ACGCCGCAGC ATGTGCGGCA GATCGTTGAG
CTGGCGCGCG AGATGTTTGA CTTCGTGATC ATCGATGTCG GGCGATCCTT GAGTTCGGTC
ACGCTGCAGG CACTGGATCT GGCTGACCGG GTCTACGCGG TGTTGCAACT GACACTGCCT
TTCATCCGGG ACGGCAAGCG CCTGCGCAAT GTGTTTCGTT CGCTTGACTA TCCCGCGCAC
AAAATTCAGT GGATCGTCAA TCGCTACCAG AAGGGCAGCC AGTTCACCAT CGACGACCTG
AAGAAAACGC TGGCGATCAA CCAAGTGATC ACGCTGCCGA ACCACTACGA AGCGGTGGCG
GCATCGGTCA ACCAGGGGGT TCCGGTCGAG CGCATCGCGC CGAACAGCAC GATCGCCAGG
AGTCTTCGCG AGCTTGCTGA GAATATCGCG CCGCCGCCCC TTGGCCAGGC CCGCACAGGC
TGGCTGTCGG GTCTGTTCCA CGGTGCACCG CAATGA
|
|---|
| Protein sequence | MKIKLITPDP FNAEAWTDVL RVEPAFDVTP IVCALRDVKV IFNGSRPDLV LVETATPQDF
EALEALANAH PEIDYVLVGN ELSPEFLLRA MRAGVREVLP SPAAPEAVLA ALRRQLRKRA
PATVLPATHH AEVLALVSCK GGSGATFIAA NLAHLLAAGG QRQVALIDMN LQFGDAALFV
SSQTPVSNVA DVARNINRLD ADLLRSSMTE VAPGLWVLAA PDDPAQATDV TPQHVRQIVE
LAREMFDFVI IDVGRSLSSV TLQALDLADR VYAVLQLTLP FIRDGKRLRN VFRSLDYPAH
KIQWIVNRYQ KGSQFTIDDL KKTLAINQVI TLPNHYEAVA ASVNQGVPVE RIAPNSTIAR
SLRELAENIA PPPLGQARTG WLSGLFHGAP Q
|
|---|
| |