| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_0792 |
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| Symbol | |
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| ID | 3964210 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodoferax ferrireducens T118 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007908 |
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| Strand | + |
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| Start bp | 829348 |
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| End bp | 830208 |
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| Gene Length | 861 bp |
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| Protein Length | 286 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637915622 |
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| Product | Flp pilus assembly CpaB |
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| Protein accession | YP_522073 |
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| Protein GI | 89899602 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3745] Flp pilus assembly protein CpaB |
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| TIGRFAM ID | [TIGR03177] Flp pilus assembly protein CpaB |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.0325336 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGATCAC GTGGCATATT AATGCTGTTT ATTGCGGTCA TTGCGGGCTT GGCCGCGGTA
TTTCTGGCGA CGCGCTGGAT GCAGGGCCAG GGCGGCGAGG GCGGGCGCAT CGCGGTGGCG
AACACCGACA TCGAGCTCGG CGGGCGCATC TCGCCCGAGA TGATTCGCAT GGCCGACTGG
CCCCTGGGTA GCACGCCCAC CGGTGCCTAC AAGGAGGCTG CCAAGCTCGA AGGCCGGGTT
GTCCTGGTGT CGATGCAGCG CGGGGAGCCG CTCATTGAAG CGCGGCTGGC GCCAATCGGC
ACCAAGGGCG GCTTGTCTGC CGTCGTGCCA CAAGGCAAGC GCGCCATGAC TGTGCGCGTG
AACGATGTGG TTGGCGTGGC CGGCTTCGCG CTGCCGGGCA CGTTCGTTGA TGTGATGGTC
AACACCCAGG ATGAAGGCGG CCAGCGCAAC GACCGCGATC GCTCGGTCTC AAAAATTGTG
CTCGAACGCA TCCTGGTGCT CGCCGTGGCC CAGGAGGCCG ACCGCGACTC CACCAAGCCC
AGGGTGGTGA ATGCGGTGAC GCTGGAAGTC ACCCCCAGGG ACGCAGAGAT GCTCGATCTG
GCGCGCAGCG TGGGCACCTT GTCGCTGGTG CTGCGCAACC AAACCGATCC GAAGGGGGTC
GCTGCCACGG GCGGCGCCAC AAAGGCCGAA TTGCTCGGCC TGGCCAAATC TGAACCCGCC
AAACCAGCCG TTACGCCATT GGCCCCGGCA CGCCATGTCG TGCGTCGCGT CGTCGCCCCA
GCTGTGGCGG CTGCGCCGGC GCCATCCAAA AATTGCGTTG AGATCATTCG TGGCCTGAGC
AAGGTGACCG AGTGTTTCTG A
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| Protein sequence | MRSRGILMLF IAVIAGLAAV FLATRWMQGQ GGEGGRIAVA NTDIELGGRI SPEMIRMADW
PLGSTPTGAY KEAAKLEGRV VLVSMQRGEP LIEARLAPIG TKGGLSAVVP QGKRAMTVRV
NDVVGVAGFA LPGTFVDVMV NTQDEGGQRN DRDRSVSKIV LERILVLAVA QEADRDSTKP
RVVNAVTLEV TPRDAEMLDL ARSVGTLSLV LRNQTDPKGV AATGGATKAE LLGLAKSEPA
KPAVTPLAPA RHVVRRVVAP AVAAAPAPSK NCVEIIRGLS KVTECF
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