Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rfer_0783 |
Symbol | |
ID | 3964201 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodoferax ferrireducens T118 |
Kingdom | Bacteria |
Replicon accession | NC_007908 |
Strand | + |
Start bp | 820663 |
End bp | 822093 |
Gene Length | 1431 bp |
Protein Length | 476 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 637915613 |
Product | hypothetical protein |
Protein accession | YP_522064 |
Protein GI | 89899593 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.628796 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGCGAAAAA TAGTGGCAAT CTTGGCGGTT CTACTGTCAG CAGTCTTGGT TGGATGCGGG GGAGGGAGCG ATAGCGGCCC CGTTGCCTGC AGAGCTACGA TGGCAAACCC TGACCTCTGT CTCACTGGCG CTACGGCTTC GGTTGGAGCG GCCGCATCAA TCAAATTTAT TTCCGCGGAC ACAACCAATA TTGCGCTCAA GGGCACCGGG GGCTTCGGAC GCCAGGAGTT CTCGACCCTC AAGTTCCAGG TCTTTGACAA TGCGGGGAAA CCGGTTGCAG GCACACCGGT CAATTTCGTG TTCTCCGACT CCAACGCCGC GCAAACGGTG GGCGGGCTCA CTTTGTTGCC CACTGCCACC TCCGCTCTCG ATGGCTCCAT GACGACGGTG GTTTCAGCAG GAACAATTCC CACGTCGGTC CGCGTTGTTG CTTCGATTAG CGGGGGGATT ACAACCCTCT CCAATATCCT GGTGATTTCA ACCGGCGTGC CGGATCAGAA CCACTTTTCT CTGGCCACCG AAACTGGCAA TTGCGAGGGA AGGGATGTGG ATCAGACCTG CAGCTTCGTC ACGGCCACTT TGGGCGATCA TTTTGGCAAC CCCGCTCCTG ATGGCACGGC AGTCAATTTC ACCACTAGCG CGGGGGTCAT AGGCGCCTCG TGTGTCACGG GATCGCTCCC GCCTCCCGGT GCGACTCCGA ACATCTGTAC GCCTCAAACT TGTCAGACTA CAAATTCAAA AATCGGCCCA GGATCGGGAA CCTGCACTGT GTTGCTGCGA GCAAGTAATC CACGGCCGGC AAATGGGCGC GTGACGATTC TTGCCTATGC TGTGGGCGAG GAGAATCTTT TCGACGCCAA CGGCAACAAC GTGTATGACT CCGTTGATAC CTTCACCGAT AAAAGCCCGG ACATTTTTCG CGACGACAAC GAGACTGGCA TATGGAGTCC AGGCGAGCCA TGCATCGGAC CCAACCTGAA TGGTACTTGC AGCACGCTCG GCGATGGCAA GTACAACGGC GTGCTGCGTA GTCCGCAGGT TCCAAGTGCG CAGACCTTGT ATGTCTCTGC TCAGCTTGTG CAAACATTTT CTGGCAGCCA TGCCCTCGTC AGTTTCAATC CATCGGCGCT GTCGTGCCCG GCTGGCGGCA CGGCAGTCGT TCAGGTGGCC GTCACGGACG AGATTGGAAA TATCATGCCC GCTGGCACCA CCATTGACCT CAGCACGGTG TTTGGTACGG CCGTTGGTAC AGTGTCCCCT GCCAGCATCA AGGTTCCAAA CGTCGTTCTC GCCGTTGGTC AACCGCTGAC TATCCCGACC TACCCCGTGA CCGTGGGCTG CCCCAGCCCG GCAGCTAGCG GGCAATTATT TGTGACTGTT ACGTCGCCAA CCACGGCGAC CATAACGCGT GCCAGTGCTC CAATCAATTG A
|
Protein sequence | MRKIVAILAV LLSAVLVGCG GGSDSGPVAC RATMANPDLC LTGATASVGA AASIKFISAD TTNIALKGTG GFGRQEFSTL KFQVFDNAGK PVAGTPVNFV FSDSNAAQTV GGLTLLPTAT SALDGSMTTV VSAGTIPTSV RVVASISGGI TTLSNILVIS TGVPDQNHFS LATETGNCEG RDVDQTCSFV TATLGDHFGN PAPDGTAVNF TTSAGVIGAS CVTGSLPPPG ATPNICTPQT CQTTNSKIGP GSGTCTVLLR ASNPRPANGR VTILAYAVGE ENLFDANGNN VYDSVDTFTD KSPDIFRDDN ETGIWSPGEP CIGPNLNGTC STLGDGKYNG VLRSPQVPSA QTLYVSAQLV QTFSGSHALV SFNPSALSCP AGGTAVVQVA VTDEIGNIMP AGTTIDLSTV FGTAVGTVSP ASIKVPNVVL AVGQPLTIPT YPVTVGCPSP AASGQLFVTV TSPTTATITR ASAPIN
|
| |