| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_0779 |
|---|
| Symbol | |
|---|
| ID | 3964197 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodoferax ferrireducens T118 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007908 |
|---|
| Strand | + |
|---|
| Start bp | 816056 |
|---|
| End bp | 817342 |
|---|
| Gene Length | 1287 bp |
|---|
| Protein Length | 428 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 637915609 |
|---|
| Product | putative RNA methylase |
|---|
| Protein accession | YP_522060 |
|---|
| Protein GI | 89899589 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG0116] Predicted N6-adenine-specific DNA methylase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGAACCAAC TGCAACTCTT CTTGCCCTGC GCCGCTGGCG TGGAAGACTA CCTGGCCCCC
GAGGTGCTGC GCATCACCGG CTTGCCGCCG GGCTGCGTGA CCAAGCAGCG CGGCGGCGTG
GCCGTGCGCA CGTCCTTCGC GCACGCGATG CTGCTCAACC TCTACAGCCG GCTGGCGCAG
CGTGTGCTGG TGCTGCTGTC GTTCACCGAG TACCGCAACG AACAGGATTT GTACCGCGCC
GCCAGTGAGG TGGCCTGGGA GCGCTGGTTC ACGCCGCGCG AAAGCATCAA GGTGGAAGTG
ACGGCGCAGC ACAGCCCGCT GACCAGCCTC AACTTTGCCG CGCTCAAGAT CAAGGACGCG
GTGTGTGACC GTTTCCGCGT CACGGCGGGC GGCGTGCGCC CGGACGTCAA CACCCAGTGG
CCCGATGTGC GCATCTACAC GCACCTGACC ACCGACAGCT GCTCGCTCTA CATCGACACC
TCGGGCGAGC CCCTGTTCAA GCGCGGCTGG CGCGAAGACA AGGGCGACGC GCCCTTGAAA
GAAACCCTGG CCGCCGCCAT GCTGGCCGCC AGTGGCTGGG CCGATGGCGA CGAGGATTTG
CTGCCGCTGT ACGACCCCTG CTGCGGCAGC GGCACGATTG TGATTGAAGC GGCCCAGATC
GCCTGCAATA TTGCCGCCGG CTCGCTGCGC CGTTTTGCCT TCGAGAAGTA TTTGCCGTTC
CAGCGCCCCG TCTGGGATGC TATAAAAAAA GAAGCTAAAG AGTCAGAAGT GACGAGGGCT
CCAGGCCAAA AACCTATTAT TTTCGGCAGT GACGTGGCGC ACCGCATGGT CGACTTTGCC
CAGCGCAACG CGCAGCGCGC CGGCGTTGCC GACGTGATCG AGTTTCGCGG TGGCGACGCC
TTGCAGCGCC TGCCGCCGAT TGATATTCCT GGTGTGATGC TGCTCAACCC ACCGTATGGC
GAGCGCATCG AGGTCGCCGG TGTGGCCAAA GGGGCGCGCC ACGCGGCCAG CCAGTTTGAG
GACGAAGAGG CCGAAGTGGG TCGTTTTGGT GCCCGCGAGC TGCCGCAGAC GCAGGAAGGT
GGCGAATTCT TCAGCCAGCT GGCCAGCCAC TGGAAGAAGA ACTACCCCGG CTGGAGCGCC
TGGATACTCA CGCCCGACCT GAAACTGCCG GGCAAAATGC GCCTGAAAGA ATCGCGCCGC
GTGCCGATGT GGAATGGCCC GATCGAATGC CGCCTGTTCC GCTTTGACAT GGTGGCCGGG
AAAATGGGGT CGGCGCGGGC GACATGA
|
|---|
| Protein sequence | MNQLQLFLPC AAGVEDYLAP EVLRITGLPP GCVTKQRGGV AVRTSFAHAM LLNLYSRLAQ
RVLVLLSFTE YRNEQDLYRA ASEVAWERWF TPRESIKVEV TAQHSPLTSL NFAALKIKDA
VCDRFRVTAG GVRPDVNTQW PDVRIYTHLT TDSCSLYIDT SGEPLFKRGW REDKGDAPLK
ETLAAAMLAA SGWADGDEDL LPLYDPCCGS GTIVIEAAQI ACNIAAGSLR RFAFEKYLPF
QRPVWDAIKK EAKESEVTRA PGQKPIIFGS DVAHRMVDFA QRNAQRAGVA DVIEFRGGDA
LQRLPPIDIP GVMLLNPPYG ERIEVAGVAK GARHAASQFE DEEAEVGRFG ARELPQTQEG
GEFFSQLASH WKKNYPGWSA WILTPDLKLP GKMRLKESRR VPMWNGPIEC RLFRFDMVAG
KMGSARAT
|
|---|
| |