Gene Rfer_0760 details

Gene Information

• Locus tag: Rfer_0760
• Symbol: holA
• ID: 3964138
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Rhodoferax ferrireducens T118
• Kingdom: Bacteria
• Replicon accession: NC_007908
• Strand: +
• Start bp: 794734
• End bp: 795798
• Gene Length: 1065 bp
• Protein Length: 354 aa
• Translation table: 11
• GC content: 65%
• IMG OID: 637915590
• Product: DNA polymerase III subunit delta
• Protein accession: YP_522041
• Protein GI: 89899570
• COG category: [L] Replication, recombination and repair
• COG ID: [COG1466] DNA polymerase III, delta subunit
• TIGRFAM ID: [TIGR01128] DNA polymerase III, delta subunit

Plasmid Coverage information

• Num covering plasmid clones: 22
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCAGCTCG CCCCTCACCA ACTCGCCAAC CACTTGCAGA AAGGCCTGAA AAGCCTGTAC 
ACCGTGTATG GCGACGAGCC GTTGCTGGTC CAGGAGGCGG CGGACGCTAT TCGCGCGTTC 
GCCCGCACCC AGGGCTTTAC CGAGCGCAGT TCGCACACGG TGGCCGGGGC GCACTTTGAC 
TGGAGCGAGG TGCTGGCGGC CGGCGGCTCC CTGAGCTTGT TCGCTGACAA GCAGATCGTC 
GAGTTGCGTA TTCCCTCCGG CAAACCCGGC AAGGAGGGCG GCGTGGCGCT GCAGCAACTG 
GCCGAACAAG CGCGCGGCAA CGAGTCAACC CTGACCCTTG TCATGCTGCC GCGGCTCGAC 
AAGCTGGGCA AAGGCAGCGC CTGGTTTGGC GCGCTGGAGA GTTTTGGCAT CACGCTGGCG 
GTGGAGCCGG TTGAGCGTAA TGCCTTGCCA GCGTGGATTG CGCAGCGTCT GGCCGTTCAA 
GGCCAGCGTG TGGCCGCCGG TGAAGCTGGT CAGCACAGCT TGCAGTTCTT TGCCGACCGG 
GTGGAAGGCA ATTTGCTGGC AGCGCATCAG GAAATCCAGA AACTTGCCCT GTTGTATCCG 
CCCGGCGAGT TGACGTTTGA CCAGATTGAG AGCGCCGTGC TCAACGTGGC GCGCTACGAC 
GTGTTCAAAC TGTCGGACGC CGTGCTCTCG GGCCAGGTCG TTCGCGTGCA GCGCATGCTG 
GACGGCTTGC AGGCCGAGGG TGAGGCGGCG GTGCTGGTGC ATTACACCCT GGCCGAGGAC 
ATACGCGCCT TGAAACGTGT CAAAGATGCG ATGAACCGTG GCAGTCCGCT GCCGATGGCC 
TTGCGCGAGC AGCGCGTGTG GGGCACGCGC GAGCGTTTGT TTGAACGCGT GCTGCCGCGC 
CTGGGTGACG CTGCCCTGGC AAGCTTGCTG CGGGCGGCGC ACCAGGTCGA TGGTGTGGTC 
AAAGGCCTCA AGTCCCCCGA CTGGCCCACG GAGCCCTGGG CTGCGTTGCA ACAGCTGGCG 
TTTGATTTGT GCCGCGAATG CGCCCGCGTG CCGGGCAAGC GCTAA 

 

Protein sequence

MQLAPHQLAN HLQKGLKSLY TVYGDEPLLV QEAADAIRAF ARTQGFTERS SHTVAGAHFD 
WSEVLAAGGS LSLFADKQIV ELRIPSGKPG KEGGVALQQL AEQARGNEST LTLVMLPRLD 
KLGKGSAWFG ALESFGITLA VEPVERNALP AWIAQRLAVQ GQRVAAGEAG QHSLQFFADR 
VEGNLLAAHQ EIQKLALLYP PGELTFDQIE SAVLNVARYD VFKLSDAVLS GQVVRVQRML 
DGLQAEGEAA VLVHYTLAED IRALKRVKDA MNRGSPLPMA LREQRVWGTR ERLFERVLPR 
LGDAALASLL RAAHQVDGVV KGLKSPDWPT EPWAALQQLA FDLCRECARV PGKR