Gene Rfer_0751 details

Gene Information

• Locus tag: Rfer_0751
• ID: 3960154
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Rhodoferax ferrireducens T118
• Kingdom: Bacteria
• Replicon accession: NC_007908
• Strand: +
• Start bp: 786857
• End bp: 787324
• Gene Length: 468 bp
• Protein Length: 155 aa
• Translation table: 11
• GC content: 59%
• IMG OID: 637915581
• Product: PTS IIA-like nitrogen-regulatory protein PtsN
• Protein accession: YP_522032
• Protein GI: 89899561
• COG category: [G] Carbohydrate transport and metabolism; [T] Signal transduction mechanisms
• COG ID: [COG1762] Phosphotransferase system mannitol/fructose-specific IIA domain (Ntr-type)
• TIGRFAM ID: [TIGR01419] PTS IIA-like nitrogen-regulatory protein PtsN

Plasmid Coverage information

• Num covering plasmid clones: 8
• Plasmid unclonability p-value: 0.00822403
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAATCGAC TCGCAGCCAT CCTCCCCCTT GCACAGGTGC TTGTGCAGGT TGATGCCACC 
AGCAAAAAGA GAGCTTTTGA AGAAGCGGGT TTGCTGTTCG AAAACCTGCA TGGTCTCAGC 
CGTTCACTGG TCACCGACAG CCTGTTTTCC CGCGAGCGGC TGGGCTCCAC CGGCTTGGGG 
CACGGCGTTG CCATTCCGCA TGGCCGCATC AAGGGCCTGA AGTTGCCCAT GGCCGCCGTG 
CTGCAGTTGA CCCGCCCGAT CGGCTTTGAT GCGCCGGACG AGCAACCGGT CAATTTGCTG 
ATTTTTCTGC TGGTGCCCGA GTCGGCGACG CAAAAGCATC TGGAAATCCT CTCGGAAATA 
GCCGAAATGC TCAGCGACGC GACCTTGCGG GAAAAAATGG CGCTCAGTGC CAGCGCGGAG 
GAACTGCATG GGTTCATTGT CAAATGGCAA TCGGCCCAGG TGGTCTGA 

 

Protein sequence

MNRLAAILPL AQVLVQVDAT SKKRAFEEAG LLFENLHGLS RSLVTDSLFS RERLGSTGLG 
HGVAIPHGRI KGLKLPMAAV LQLTRPIGFD APDEQPVNLL IFLLVPESAT QKHLEILSEI 
AEMLSDATLR EKMALSASAE ELHGFIVKWQ SAQVV