Gene Rfer_0739 details

Gene Information

• Locus tag: Rfer_0739
• Symbol: ruvA
• ID: 3960142
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Rhodoferax ferrireducens T118
• Kingdom: Bacteria
• Replicon accession: NC_007908
• Strand: +
• Start bp: 778458
• End bp: 779030
• Gene Length: 573 bp
• Protein Length: 190 aa
• Translation table: 11
• GC content: 63%
• IMG OID: 637915569
• Product: Holliday junction DNA helicase RuvA
• Protein accession: YP_522020
• Protein GI: 89899549
• COG category: [L] Replication, recombination and repair
• COG ID: [COG0632] Holliday junction resolvasome, DNA-binding subunit
• TIGRFAM ID: [TIGR00084] Holliday junction DNA helicase, RuvA subunit

Plasmid Coverage information

• Num covering plasmid clones: 11
• Plasmid unclonability p-value: 0.0805847
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGATCGGCA AATTAAGCGG CACGCTCGAC GACAAGAATC CACCGCAAGT GATCGTGGAC 
TGTCACGGCG TGGGCTATGA GGTTTTGGTG CCGATGAGCA CTTTTTACAA CCTGCCCGAG 
CTGGGCGCCC GGGTGAGCCT GCTGACGCAT TTTGTGGTGC GTGAAGACGC GCAGATCCTG 
TATGGCTTTG CCACCAGCCA GGAGCGCGCG GCGTTTCGCG AGCTGATCAA AATATCGGGC 
GTCGGGCCGC GCACGGCACT CTCGGTGCTG TCGGGCATGA GCGTGGCTGA GCTGGCGCAG 
GCGGTCACAC TGCAAGAAGG CGGGCGGCTG ATCAAGGTGC CCGGTATCGG CAAGAAAACC 
GCCGAGCGGC TGCTGCTGGA GCTCAAAGGC AAACTCGGTC CCGATATCGG TGTCGCCGCC 
AGTGTGGCCA ATGACAGTCA GGCCGACATT TTGCAGGCGC TGCTGGCGCT CGGTTACAGC 
GACAAGGAGG CCGCCGCCGC CTTGAAGGCG CTGCCGAGTG ACGTGGGCGT GAGCGAGGGC 
ATCAGGTTGG CGCTGCGGGC CTTGGGGAAG TAG 

 

Protein sequence

MIGKLSGTLD DKNPPQVIVD CHGVGYEVLV PMSTFYNLPE LGARVSLLTH FVVREDAQIL 
YGFATSQERA AFRELIKISG VGPRTALSVL SGMSVAELAQ AVTLQEGGRL IKVPGIGKKT 
AERLLLELKG KLGPDIGVAA SVANDSQADI LQALLALGYS DKEAAAALKA LPSDVGVSEG 
IRLALRALGK