| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_0733 |
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| Symbol | |
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| ID | 3961676 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodoferax ferrireducens T118 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007908 |
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| Strand | + |
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| Start bp | 771855 |
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| End bp | 773402 |
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| Gene Length | 1548 bp |
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| Protein Length | 515 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637915563 |
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| Product | threonine dehydratase |
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| Protein accession | YP_522014 |
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| Protein GI | 89899543 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1171] Threonine dehydratase |
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| TIGRFAM ID | [TIGR01124] threonine ammonia-lyase, biosynthetic, long form |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.880513 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACGACCG AACACCTCAA ACCCGCCGAC TACCTGAAAA AAATCCTGAC CGCCCGCGTC
TATGACGTCG CCGTCGAGTC CGCGCTGGAG CCGGCCCACG CCTTGAGCCA ACGCCTGCAC
AACACCGTGC TGCTCAAGCG CGAGGACCAG CAGTCGGTGC ACAGCTTCAA GCTGCGGGGT
GCCTATAACA AGATGGCGCA CCTGACGCCG GAGCAGTTGA AGAAAGGGGT GATTTGCGCC
TCGGCCGGCA ACCACGCCCA AGGTGTGGCA CTGAGCGCGA AGCGCCTGGG CACGCGCGCT
GTCATCGTCA TGCCCACCAC CACACCGCGG CTCAAGATTG ATGCGGTGCG TGGTCTTGGC
GGGGAGGTGG TCTTGTTCGG CGACAGCTAT TCCGATGCCC ATGCCCATTC AGTCGAACTG
CAAGAGCAGC AGGGCCTGAC CTTTGTGCAT CCGTTTGACG ACCCGGACGT GATTGCCGGC
CAGGGCACGA TTGCGATGGA AATCTTGCGC CAGCACCAGG GGCGGCTCGA CGCCGTGTTT
GTGGCCATCG GTGGCGGCGG CCTGATCTCG GGTGTGGCCA ACTACATCAA GGCGGTGCGC
CCGGAGGTCA AAGTGATCGG CGTGCAAATG AACGACTCCG ACGCCATGAT GCAATCCATC
GCGGCGAAAA AGCGCGTCAC ATTGCCGGAC GTCGGCCTGT TCTCGGACGG CACGGCGGTG
AAACTGGTGG GCGAGGAGAC CTTTCGCATC AGCCGCAAGC TGGTTGATGA GTTTGTCACC
GTGGACACCG ACGCGGTGTG CGCTGCGATC AAGGATGTGT TTGTCGATAC CCGCAGCATT
GTGGAGCCCG CCGGTGCGCT GGCGGTGGCG GCGATCAAGC AGTATGTCGC GGCGCACAAG
ACCAAAGGCG AAACCTATGC CGCCATTCTG TGCGGCGCCA ACATGAACTT TGATCGCCTG
CGCTTTGTCG CCGAGCGTGC CGAGGTGGGC GAAGAGCGGG AAGCCTTGTT TGCTGTCACG
ATTCCCGAGG AGCGCGGCAG CTTCAGGCGT TTTTGCGAGT TGATCGGCAA CCTGCCGGGT
GGCCCGCGCA ATGTGACCGA ATTCAACTAC CGCATCAGCG AAGCGGCGCA AGCCCATGTC
TTCGTTGGCC TGACGACACA CGGCAAAGGC GAATCGATCA AGATTGCCGC CAACTTTTCC
AGGCATGGCT TTGCCGCGCT GGATTTGACG CACGATGAAC TGGCCAAGGA GCACATCCGC
CACATGGTCG GGGGCCATTC AAAATTGGCG CAGGACGAGC GCCTGTTGCG TTTTGTCTTT
CCCGAGCGGC CCGGTGCGCT GCTGAAGTTC TTGAGCCTGA TGCGCCCGGG CTGGAACATC
AGCCTGTTTC ACTACCGCAA CCAGGGCGCG GACTACGGCC GTATTCTGGT CGGCTTGCAA
GTGCCGCAGG CCGACACCGC CGACTTTGAC GAGTTTCTCG ATACGCTGGC CTACCCGTAT
GTGGAAGAAA CCGCCAACCC GGTGTACCGG ATGTTTTTGC AGTCATGA
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| Protein sequence | MTTEHLKPAD YLKKILTARV YDVAVESALE PAHALSQRLH NTVLLKREDQ QSVHSFKLRG
AYNKMAHLTP EQLKKGVICA SAGNHAQGVA LSAKRLGTRA VIVMPTTTPR LKIDAVRGLG
GEVVLFGDSY SDAHAHSVEL QEQQGLTFVH PFDDPDVIAG QGTIAMEILR QHQGRLDAVF
VAIGGGGLIS GVANYIKAVR PEVKVIGVQM NDSDAMMQSI AAKKRVTLPD VGLFSDGTAV
KLVGEETFRI SRKLVDEFVT VDTDAVCAAI KDVFVDTRSI VEPAGALAVA AIKQYVAAHK
TKGETYAAIL CGANMNFDRL RFVAERAEVG EEREALFAVT IPEERGSFRR FCELIGNLPG
GPRNVTEFNY RISEAAQAHV FVGLTTHGKG ESIKIAANFS RHGFAALDLT HDELAKEHIR
HMVGGHSKLA QDERLLRFVF PERPGALLKF LSLMRPGWNI SLFHYRNQGA DYGRILVGLQ
VPQADTADFD EFLDTLAYPY VEETANPVYR MFLQS
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