Gene Rfer_0726 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRfer_0726 
SymbolanmK 
ID3961669 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodoferax ferrireducens T118 
KingdomBacteria 
Replicon accessionNC_007908 
Strand
Start bp765198 
End bp766367 
Gene Length1170 bp 
Protein Length389 aa 
Translation table11 
GC content63% 
IMG OID637915556 
Productanhydro-N-acetylmuramic acid kinase 
Protein accessionYP_522007 
Protein GI89899536 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG2377] Predicted molecular chaperone distantly related to HSP70-fold metalloproteases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGTCTGATC TGTATATTGG CCTGATGTCC GGCACCTCGC TGGACGGCGT GGACGGCGTA 
GTGGTCGATT TTTCTGGCGC GCACCTGCGT GTTTTGGCGC ATGTCAATGC GCCTTTGTCG
ACGGCCTTGA CCCATGAGTT ACTGGCCCTC AACAGCCCTG GCACGAACGA ATTACACCGC
GCGGCACTGG CCGCCAATGC CTTGGTACGC GTCTATGCCC ACGTGGTGGC CCAGTTGCTT
GAATTGGCGG ACATCGAGCA CAGCGCCGTC GCGGCCATCG GCGCCCACGG CCAGACGGTG
CGCCATCAGC CGCAGTCCTT TGACGGCACC GGCTACACCC TGCAACTCAA TAACCCCGCC
CTGCTGGCCG AGCTGACCGG CATGGACGTG GTTGCCGATT TCCGTAGCCG CGATGTGGCG
GCCGGCGGCC AGGGTGCGCC GCTGGTACCG GCTTTTCACC AATCGGCATT CGGGCAGCCC
GACCAGACGC TGGCCGTGCT GAATCTGGGC GGCATGTCCA ACCTGACCGT ATTGGGCCCT
TGCCCCGCCA CTGAATCTCC AGCGGGCGTG CTGGACGCTG ACCCACCCTC TTGTTTTCAC
AGCCATGACG TGCTGGGTTT TGACTGCGGC CCCGGCAACG CCTTGATGGA CACGTGGTGC
CTGCAGCACA TCGGTCAACC GTTCGACGCC GACGGTGCAT GGGCCGCAGC CGGGCGCGTG
CATGGCGAGT TACTCGCGGC CTTGCTGGAC GAGCCCTACT TTGCGCAATC CGCGCCGAAA
AGCACGGGGC GCGACCTGTT CAACTCTGGC TGGCTCACCT GGAAACTTGA AAAATTCTCC
TCGGTAGCGC CGGTGGATGT GCAGGCGACA CTCACCGAAC TGACGGCCAG CGTATGTGCC
ACCTGCGTCA AGCGCTACGG TTCCGAGAGC AGCACCCTGA TTGTGTGCGG CGGCGGCGCA
TTCAACAGCC ACCTGATGGT GCGACTGCAA GCACTGCTGC CAAGGCTGAA AGTGATCTCT
TCGCAAGCCC GCGGTTTACC GCCCTTGCAA GTGGAAGCCG CCGCTTTTGC CTGGCTGGCA
CGCAATACGC TGTTACGCAA AACTTCAAGC CTGGAAAAAG TAACGGGCGC CAGCGGCGCC
CGTATCTTGG GTGCGATCTA CCCGGCCTGA
 
Protein sequence
MSDLYIGLMS GTSLDGVDGV VVDFSGAHLR VLAHVNAPLS TALTHELLAL NSPGTNELHR 
AALAANALVR VYAHVVAQLL ELADIEHSAV AAIGAHGQTV RHQPQSFDGT GYTLQLNNPA
LLAELTGMDV VADFRSRDVA AGGQGAPLVP AFHQSAFGQP DQTLAVLNLG GMSNLTVLGP
CPATESPAGV LDADPPSCFH SHDVLGFDCG PGNALMDTWC LQHIGQPFDA DGAWAAAGRV
HGELLAALLD EPYFAQSAPK STGRDLFNSG WLTWKLEKFS SVAPVDVQAT LTELTASVCA
TCVKRYGSES STLIVCGGGA FNSHLMVRLQ ALLPRLKVIS SQARGLPPLQ VEAAAFAWLA
RNTLLRKTSS LEKVTGASGA RILGAIYPA